Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00699 ATGTTCCTGCCAGGACTAGCCTCTACCTGTGTTGATAACACAACAGGAGATCCCTTCAAGACCCCTGGTTTAGTGGCTGTTCATTTGAGAAAGGAGATGGTAGAATATGTCACCCAAAAGAGTGAATCATTTGTTGCTGAGTTTGTTATCTTAGAGGGTGGTCCTGAGGGTGAAACCTTGGAACACTCTTTTGACATCATTTCTCATTTTGTTGGAGATGGAGATGAATGCTTTTTGGCCACTGGATAG 249 0.4337 MFLPGLASTCVDNTTGDPFKTPGLVAVHLRKEMVEYVTQKSESFVAEFVILEGGPEGETLEHSFDIISHFVGDGDECFLATG 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00699 82 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 2 73 IPR043211 -
Cca02g00699 82 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 2 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00699 Cca-Chr2 16440732 16441071 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00699 - - gmx:100799182 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00699 02 16440732 16441071 Cca02g00699 02 16440732 16441071 ECH
Cca03g02631 03 47675854 47680123 Cca02g00699 02 16440732 16441071 PCT