Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00689 ATGAAATTGCGTTCAAAGTCTTTCAAAATCCGAGGCTGTACATGGAAGATCCTTGTGTATCCACTGAGGAGAGACGTGAACCATTTTTCAGTCTATTTGATGGTTGGTGATTCTTTGCCACCGTATGGATGGAGTAGAAACACGTTTTTCAAGTTAGTTCTAGTTAATCAGGTGGATCGGAAGAAGTCAATTGAAAAATTAACTCAACAAAAGTTCAATGGAGGACATCGTAGCTGGGGTTCATTTTTCTTGAATCTCAGTGATTTCCACGATCATAAACAAGGGTACCTTGTGAGGAACACATGCATCATTGAAGCACACATTTGTGTCTCCGATATAGCACAAAAGACTCTAGTTTACCCAAATTGTTCTCCAACCCATGATTCTCTACCAGGTGGTGGTCATGATCAAGCAACAGAATCATCCTCAGATGACAGAGACAGTAGCATTAGTCCCAGAACCTCAGGATCAAGTTCAGCAGAAGGAGAAGCTCGAGGTTTGACACTAAGGGAACTCATAGACTTGGAGAGTTTAGAGCCAGAAGAAGCAGCATTCATTCCACTCTTGGAAGAGGTTTGCATATGGCACCCTAACCTGATACAATGTCAGAAGAAAAGGAGTGTGAGGTTTAGACAATGGGCCTTCACATCTTTGGGCCAGGTTTTGCACTTCCTCAAGACTAAGAAGGTGAAGGACATGAGAGATGAGGACATAAAGTACCTTGATGGTTTGTGGAAGGAACTGGTGAAGTCCTCAGGGTTTGACCTGGCTTGGCTGCAGCCATATGTTGAATCAGCTTTGGGGTTGAAAGCTTACATGGAAAGAGCAAAGCAGCTGAAGAAACTTAAGGACAGTGTGGTTGGTTTGGAGATCAAGATGAAGAGGCTCAGGGGGGAACTGGCTAATGCTGAAAAGGAGTTTGACGTTGCAAGAAGAGGCTTGTCTGAAGTGAGAAGGGGTTTCAATGAGATGGATGTAAATGCTGCAATTGGTTATGCCATGTTTTAG 1008 0.4335 MKLRSKSFKIRGCTWKILVYPLRRDVNHFSVYLMVGDSLPPYGWSRNTFFKLVLVNQVDRKKSIEKLTQQKFNGGHRSWGSFFLNLSDFHDHKQGYLVRNTCIIEAHICVSDIAQKTLVYPNCSPTHDSLPGGGHDQATESSSDDRDSSISPRTSGSSSAEGEARGLTLRELIDLESLEPEEAAFIPLLEEVCIWHPNLIQCQKKRSVRFRQWAFTSLGQVLHFLKTKKVKDMRDEDIKYLDGLWKELVKSSGFDLAWLQPYVESALGLKAYMERAKQLKKLKDSVVGLEIKMKRLRGELANAEKEFDVARRGLSEVRRGFNEMDVNAAIGYAMF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00689 335 CDD MATH 2 108 IPR002083 GO:0005515
Cca02g00689 335 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 2 317 - -
Cca02g00689 335 MobiDBLite consensus disorder prediction 128 163 - -
Cca02g00689 335 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 126 IPR008974 GO:0005515
Cca02g00689 335 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 2 317 - -
Cca02g00689 335 SUPERFAMILY TRAF domain-like 3 111 - -
Cca02g00689 335 MobiDBLite consensus disorder prediction 148 162 - -
Cca02g00689 335 ProSiteProfiles MATH/TRAF domain profile. 1 108 IPR002083 GO:0005515
Cca02g00689 335 Pfam MATH domain 5 108 IPR002083 GO:0005515
Cca02g00689 335 Coils Coil 279 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00689 Cca-Chr2 16241228 16242873 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00689 - - gmx:100797919 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00689 02 16241228 16242873 Cca03g02627 03 47641155 47642407 PCT