Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00499 ATGGATGGTAGCAGAAGATGGAGTTGGTGTTCACAAGCATGTTCAACAATCAACCTCTTCATCTTCATGGTGCCTCTCATTCTGCTTGCTGCCTTTGCCTCTTTAAAGGGTCCAACCGTTTGCAGATGGGGTTTCATTGCAAAATGTTCTTTCTCTTTCACTCCTCCTTCAAATTCTTCTCTACAATCTCACGAACCTAAAGTTCTCAATGTCTCCAAACCATGGTTCAATTCATCAGCTCCTGTGAACGAATCTGATGAACCCAAACCAAGACACAAGCAAAAGAGAAAGTTCAGCATCTTAGATAGAACTGAAGCTATTCTAGCACAAGCTCGATCTGCTATCAGAGAAGCCAGACACGAGAATCAAACACAAGATTCAGATTACGTTCCAATAGGTCCAATGTATTGGAATGCTAAGGCATTTCACAGGAGCTACTTAGAAATGGAGAAAGAGTTCAAAGTGTATGTGTACGAAGAAGGGGAGCTTCCAGTTTTCCACAATGGACCATGCAAAAGCATATACTCCATGGAGGGTAACTTCATCCATGCTATTGAAATGAATGACCATTTTCGAACAAGGGATCCAGAGAAAGCACACGTCTTCTTCCTTCCTTTTAGCGTAGTCATGATGGTGCGATTCGTGTATGAAAGGGACTCGCGCGACTTTGGCCCCATAAAGAAAACTGTCACAGACTATGTCAACCTCATTGCTCATAGATATCCCTATTGGAACCGAAGCCATGGAGCCGATCACTTCATGCTTGCATGCCATGACTGGGGGCCAGAGACATCATTGTCCTTACCTCACCTACACAAGAACTCCATTCGAGTGCTTTGCAATGCCAACACATCAGAAGGATTCGAGCCAGCAAAGGATGTTTCATTTCCGGAGATCAATCTTCAAACGGGTTCGATAAAGGGCTTCCTTGGTGGGCCATCAGCATCGAAAAGGCCCGTTTTGGCCTTCTTCGCAGGGGGGGTCCACGGGCCCATTAGGCCCGTTCTCCTGGAGCACTGGGAAAACAAGGACAAAGACATTGAGGTCCACAAGTACCTGCCGAAGCATGTTTCGTACTACGGCATGCTGAGGAAGAGCAAGTTCTGTCTCTGTCCCAGCGGGTACGAGGTTGCTAGTCCGAGAGTTGTGGAAGCGATCTACACAGGGTGCGTTCCTGTGCTGATTTCGGAGCACTATGTTCCTCCCTTCGGTGACGTTCTGAATTGGAAGACGTTCTCGGTTGAGCTTTCGGTGAAGGACGTTCCCAAGTTGAAGGAGATTTTGATGAGTGTTTCTCCGAGGCAGTATATAAGAATGCAGAGAAGGGTGGGGCAGATTCGGAGACACTTTGAGGTGCATTCTCCGCCCAAGCGATTCGATGTGTTTCATATGATACTGCATTCTGTGTGGCTTAGGAGACTCAATTTCAGACTCCATCATCATCATCAATGA 1452 0.4656 MDGSRRWSWCSQACSTINLFIFMVPLILLAAFASLKGPTVCRWGFIAKCSFSFTPPSNSSLQSHEPKVLNVSKPWFNSSAPVNESDEPKPRHKQKRKFSILDRTEAILAQARSAIREARHENQTQDSDYVPIGPMYWNAKAFHRSYLEMEKEFKVYVYEEGELPVFHNGPCKSIYSMEGNFIHAIEMNDHFRTRDPEKAHVFFLPFSVVMMVRFVYERDSRDFGPIKKTVTDYVNLIAHRYPYWNRSHGADHFMLACHDWGPETSLSLPHLHKNSIRVLCNANTSEGFEPAKDVSFPEINLQTGSIKGFLGGPSASKRPVLAFFAGGVHGPIRPVLLEHWENKDKDIEVHKYLPKHVSYYGMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFGDVLNWKTFSVELSVKDVPKLKEILMSVSPRQYIRMQRRVGQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRLHHHHQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00499 483 Pfam Exostosin family 150 430 IPR040911 -
Cca02g00499 483 PANTHER EXOSTOSIN FAMILY PROTEIN 53 479 - -
Cca02g00499 483 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 53 479 IPR004263 GO:0006486|GO:0016757
Cca02g00499 483 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00499 Cca-Chr2 10598672 10605312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00499 - - gmx:100777099 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00499 02 10598672 10605312 Cca02g00499 02 10598672 10605312 ECH
Cca03g02456 03 45644937 45648298 Cca02g00499 02 10598672 10605312 PCT