Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00479 ATGAGTTCCCATTCGGAAGCACCCAAACTCAACTTTGTTCTGTTTCCTCTCATGTCCCAGGGCCACATGATCCCCATGATGGACATAGCAAAAATCCTGTCTCAGCAGGGTGTCACCGTCACAGTGATCACCACACACCACAACGCATCACGTTTTGCATCAACTTTTGCTCGCTCCACCGATTCAGGGTCTCAAATCAGATTAGCAGAAGTGCAATTCCCATATCAAGAAGCTGGCTTGCCAGAAGGGTGTGAGAATCTTGACATGTTACCCTCCTTAGGCACTTCCTTGAGCTTCTTCAATGCAGCAAACAGCACCACCTTGAAGGAACAAGTGGAAAAGCTCTTCCAAGAGTTGAATCCTCCACCAAGCTGCATAATTTCTGACATGTGTTTGCATTACACAGCCACTATTGCCATCAAATTCAACATCCCTAGGATATCCTTCCTAGGGCAAAGTTGCTTCAGTCTCTTCTGTTTGTACAACCTTGGCATCCACAGAAGTGTTCTCTCAAGCATAGCCTCAAAAACTGAGTACTTTGTTTTGCCTGGTTTACCTGACAAGGTTGAGATGACCAAGGCTCAGCTTCCAGGGAAAAGATCAAGTGAAGAGTGGAAAGAGTTCTATGCAGGAACTGCTGCTGCTGAAGGGGTTTCTTATGGGGTGATTATGAATTCCTTTGAGGAGTTGGAGCCAGCATATGCAAGAGGCTACAACAAGGCAAAGAATGGTAAGGTGTGGTGTGTTGGTCCTGTTTCACTCAGCAACAAGGGTGAGTTAGAAAAGGCTGAGAGAGGGAACAAGGCCTCAATTGACGAGCACTATTGCATGAAGTGGCTTGATTTGCAGAAACCAAGGGGTGTGATCTATGTTTGCCTTGGAAGCATAAGTAACATGACTTCAGTGCAGTTGGTAGAGCTTGGTTTGGCCTTGGAAGCCTCAAATAAACCCTTCATTTGGGTCATCAGGGAAGGGGATCAATTAGAGGCGTTGGAGAAGTGGATCAAGGAAGAGGGGTTTGAGGAAAGGACCAAAGGTAGAAGCCTTGTGATTCGTGGTTGGGCTCCTCAGGTACTAATTTTGTCACACCCTGCAATTGGAGGCTTTTTAACACACTGTGGTTGGAACTCAACTTTGGAAGCTATATGTGCTGGTGTGCCGATGGTTACATGGCCTCTTTTTGGTGACCAGTTTTTCAATGAGAAGCTGATTGTGCAGATATTAAGAGTGGGAGTGAAGATTGGGGTGGAGTTTCCCTTGGAGTGGGGTGAGGAAGCGGAAAAGGGACAGTTGGTGAAGAGAGAAGATGTTGAGAGAGCAATTAATGAGTTGATGGATGAGAGTAGGGAGAATGAAGAAATGAGAGAAAGAGTTAGAGAACTTGCAGAGATGGCTAAGAAAGCTGTAGAGGAAGGTGGATCTTCTCACTCCAGTGTGACACTCCTTATCCAAGATATCATGCAACAAAGCAAGACATAA 1479 0.4577 MSSHSEAPKLNFVLFPLMSQGHMIPMMDIAKILSQQGVTVTVITTHHNASRFASTFARSTDSGSQIRLAEVQFPYQEAGLPEGCENLDMLPSLGTSLSFFNAANSTTLKEQVEKLFQELNPPPSCIISDMCLHYTATIAIKFNIPRISFLGQSCFSLFCLYNLGIHRSVLSSIASKTEYFVLPGLPDKVEMTKAQLPGKRSSEEWKEFYAGTAAAEGVSYGVIMNSFEELEPAYARGYNKAKNGKVWCVGPVSLSNKGELEKAERGNKASIDEHYCMKWLDLQKPRGVIYVCLGSISNMTSVQLVELGLALEASNKPFIWVIREGDQLEALEKWIKEEGFEERTKGRSLVIRGWAPQVLILSHPAIGGFLTHCGWNSTLEAICAGVPMVTWPLFGDQFFNEKLIVQILRVGVKIGVEFPLEWGEEAEKGQLVKREDVERAINELMDESRENEEMRERVRELAEMAKKAVEEGGSSHSSVTLLIQDIMQQSKT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00479 492 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 488 - -
Cca02g00479 492 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 285 404 IPR002213 GO:0008194
Cca02g00479 492 Gene3D Glycogen Phosphorylase B; 14 478 - -
Cca02g00479 492 Coils Coil 434 471 - -
Cca02g00479 492 PANTHER GLYCOSYLTRANSFERASE 9 490 - -
Cca02g00479 492 Gene3D Glycogen Phosphorylase B; 264 467 - -
Cca02g00479 492 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 9 490 - -
Cca02g00479 492 ProSitePatterns UDP-glycosyltransferases signature. 354 397 IPR035595 -
Cca02g00479 492 CDD GT1_Gtf-like 10 476 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00479 Cca-Chr2 10221911 10223389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00479 8 492 Glycosyltransferase AT2G36760 56.996 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00479 K13496 K22771 gmx:100790358 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00479 02 10221911 10223389 Cca02g00479 02 10221911 10223389 ECH
Cca03g02424 03 45341409 45342947 Cca02g00479 02 10221911 10223389 PCT