Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00451 ATGATGGTGGCAGATGTTACTGAGGTTCTTTGTGAGCTAGAACTTACTATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTGATGGATCTATTTTTCATCACAGATACTAGGGAACTTCTACATACAAAGAAGAGAAAGGACGAAACAATTGAACAGCTAACAGAGATTTTGGGGGATGCTATCATTTCTATTGACATCGAATTGGTTGGCCCGGAAATTACTGCTTGTTCCCAGGCATCTCCATTCCTTCCAACTGCAATCACAGAAGATGTTTTTAATTTGGAATTGCCTGATTTGGCTCGAAGTGGAACTCTCAGATCAGATTATGTTTCAATTGCGATGGATAACTTGCTTAGTCCTGCTCACACCCTTGTCCAAATTATGTGCCAGGACCACAAAGGTCTTCTTTTTGACATCATGAGAACTCTGAAGGACTACAACATTAAGATTTCTTATGGGCGTTTCACTACAAAACCTAGAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATAGTCGACCCCAACAAGCAGAATTCTTTGTCATCACGCCTTAGAATGGAACTACTTCGTCCACTCAGAGTTGCTATTGTGAGTAGGGGCCCTGATACCGAGCTTCTGGTTGCAAATCCTGTGGAGTTATCTGGCAAAGGCCGACCTCTTGTTTTTCATGATATCACTCTTTCTCTGAAAATGCTTGGCACTTGCATCTTTTCGGCTGAAATTGGGAGACACTTGATTGGAGATCGAGAGTGGGAGGTTTATAAAATCTTGCTTGGTGAAGGGGAGGGGTTGTCTGTTCCAAGGAACAAGATTGAAGAGGGAGTTTGGAAAATGCTGATGGGATGGGAATAA 879 0.4198 MMVADVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTKKRKDETIEQLTEILGDAIISIDIELVGPEITACSQASPFLPTAITEDVFNLELPDLARSGTLRSDYVSIAMDNLLSPAHTLVQIMCQDHKGLLFDIMRTLKDYNIKISYGRFTTKPRGKCEIDLFIMQADGKKIVDPNKQNSLSSRLRMELLRPLRVAIVSRGPDTELLVANPVELSGKGRPLVFHDITLSLKMLGTCIFSAEIGRHLIGDREWEVYKILLGEGEGLSVPRNKIEEGVWKMLMGWE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00451 292 ProSiteProfiles ACT domain profile. 1 74 IPR002912 -
Cca02g00451 292 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 3 292 IPR040217 -
Cca02g00451 292 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 3 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00451 Cca-Chr2 9562117 9565862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00451 - - gmx:100816138 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00451 02 9562117 9565862 Cca02g00451 02 9562117 9565862 ECH
Cca03g02403 03 45129403 45132514 Cca02g00451 02 9562117 9565862 PCT