Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00093 ATGGGGTTCTCCTCCTTTCTGGGTCGCGTCCTCTTTGCGTCCCTCTTCATCCTCTCAGCATGGCAGATGTTTAATGAATTTGATGCCAATGGTGGACCCATCTCGAAGGAGTTGATTCCCAAGCTCACTGTCGTGAAGAAAAATTTGTCTTCCAAATTGGGGGTAGCTCTACCAGATATTGATGCCCGGCAATTCATTTCTGTTATCATATTTCTTAAGGGGGTCGGAGGGATTTTGTTTGTGTTTGGCAACACATTTGGATCTTTTCTACTGCTTTTGCATCTGGCGCTTACTACTCCACTTCTGTACGATTTCTATAACTATAGACCCGGCAAGCCTAAATATAATCAGCTGCTGAATGAGTTCATGCTGAACGCAGCACTTTTTGGGGCATTGCTATTCTTTATTGGAATGAAGAACTCAATTCCCAGGAGTCAGCTCAGGAAGAAGAACCCTAAAGCAAAGACAGTTTAG 474 0.4388 MGFSSFLGRVLFASLFILSAWQMFNEFDANGGPISKELIPKLTVVKKNLSSKLGVALPDIDARQFISVIIFLKGVGGILFVFGNTFGSFLLLLHLALTTPLLYDFYNYRPGKPKYNQLLNEFMLNAALFGALLFFIGMKNSIPRSQLRKKNPKAKTV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00093 157 PANTHER BNAA10G27800D PROTEIN 1 156 - -
Cca02g00093 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Cca02g00093 157 PANTHER - 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00093 Cca-Chr2 1741045 1743049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00093 - - gmx:100786502 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02193 03 42659397 42662976 Cca02g00093 02 1741045 1743049 PCT