Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00070 ATGATGAACTCAAACTCACACTCACACTCTCACTCACTCCAAGATTTTGAATCCTCTTCAAGCAAAGACAACATAAACCCTATGACAaacaacaacaacaacaacataggtgcctcatcagcatcatcctcatcaacaacaacgacaacaacatcatcaccaCCTTCGACTCCAAGTCGCTACGAGAATCAAAAGCGAAGGGATTGGAACACTTTCGGGCAATACCTGAGAAACCACAGGCCCCCACTTTCCCTCTCTCGCTGCAGTGGCGCACACGTTCTTGAGTTCCTGCGCTACCTCGACCAGTTCGGGAAAACCAAGGTTCACACGCAGCTTTGTCCCTTCTTCGGGCACCCGAACCCTCCTGCACCGTGTCCCTGCCCTCTGCGCCAAGCGTGGGGGAGCCTCGACGCCCTCATAGGTCGCCTCAGAGCTGCGTTCGAAGAGAACGGAGGAAAACCTGAGGCTAACCCTTTCGGTGCTCGCGCTGTCAGACTCTACCTTCGCGAAGTTCGTGACTCGCAGGCCAAAGCTAGAGGCATCAGCTATGAGAAGAAGAAGCGCAAGCGTCCACCTCACCCACCTCCATCAAATTCAACCTCTCAGTAG 609 0.4762 MMNSNSHSHSHSLQDFESSSSKDNINPMTNNNNNNIGASSASSSSTTTTTTSSPPSTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPHPPPSNSTSQ 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00070 202 MobiDBLite consensus disorder prediction 174 202 - -
Cca02g00070 202 Pfam ALOG domain 51 173 IPR006936 -
Cca02g00070 202 ProSiteProfiles ALOG domain profile. 60 187 IPR006936 -
Cca02g00070 202 PANTHER PROTEIN G1-LIKE2 29 198 IPR040222 -
Cca02g00070 202 MobiDBLite consensus disorder prediction 1 60 - -
Cca02g00070 202 MobiDBLite consensus disorder prediction 1 66 - -
Cca02g00070 202 PANTHER PROTEIN G1-LIKE5 29 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00070 Cca-Chr2 1182598 1184951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00070 - - vvi:104879291 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02215 03 42913767 42915837 Cca02g00070 02 1182598 1184951 PCT