Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00062 ATGGAAGAGGGCAGGATCCTGAGTGAGGATTACACACAAGATGGAACTGTGGATCTTAAAGGGAAACCCATTCTCAAATCCAAAACTGGTGGTTGGAAAGCTTGCTCCTTTGTTGTTGTGTACGAGGTATTTGAAAGAATGGCATATTATGGAATATCATCAAATTTGATATTGTATCTGATAAGGAAGCTTCACCAAGGCACTGTGACCTCTGCGAACAATGTGACAAATTGGGTTGGCACCATTTGGATAACTCCTATCTTAGGTGCCTACGTTGCCGATGCTCACCTTGGTCGCTATTGGACTTTTGTCATCTCCTCCATCATCTATCTATTGGGAATGTGTCTGCTCACACTATCAGTGTCCCTTCCAAGCCTAAAGCCACCTGAGTGCCATGAAATTGATGTGACAAAATGTGAAAAGGCCTCCACACTACATCTAGCTGTGTTCTATGGTGCACTCTACACCCTAGCAGTTGGAACAGGTGGAACAAAGCCCAACATTTCCACCATCGGTGCTGACCAATTTGATGACTTTGACTCCAAAGAAAAGAAGCACAAACTCTCCTTCTTCAATTGGTGGATGTTCAGCATCTTCATTGGGACCCTCTTTGCAAATTCTGTTCTAGTCTATATACAAGATAATGTGGGGTGGACTCTAGGGTATGCTCTTCCCACTCTTGGACTTGCAATATCAATCATCATATTTTTGGCGGGCACACCGTTTTATAGACACAAATTACCCACCGGGAGTCCCTTCACTAAAATGGCCAAGGTCATAGTGGCTGCTATAAGAAAGTGGAAAGTGCCTGTTCCTAGTGACACTAAAGAACTATATGAGCTTGATTTGGAAGAGTATGAAAAGAAAAGGAGAGTCAGAATTGATTCAACTCCAACCTTGAGGTTCCTCAACAAGGCATGTGTCAAGACCAGTTCAAGTACTAGTGCATGGATGCTAAGCCCTGTTACCCATGTAGAGGAGACCAAACAAATGCTAAGAATGATCCCCATCTTGGTTGCTACACTTATCCCTAGTGCAATGGTGGCACAAATAGGTACCCTTTTTGTGAAGCAAGGAACTACACTTGATAGAGGCATTGGCAGCTTCAACATCCCCCCGGCAAGTTTATCAACATTTGTGACTCTATCCATGCTTATATGCGTGGTGCTCTATGACCGTTTCTTTGTCAAGATTATGCAAAAGTTGACCAAGAACCCTAGAGGGATAACCCTTCTCCAAAGGGTTGGAATTGGCCTGATAATCCACATAGTCATCATGGTGGTTGCATCTATAACTGAAAGGTATAGGCTTAGAGTGGCCAAAGAACATGGGTTGGTAGAAAGTGGAGGAGAAGTTCCCTTGAGCATTTTCATCTTGCTTCCTCAATTTATTCTCATGGGAGCAGCTGATGCATTTCTAGAGGTTGCAAAAATTGAGTTCTTCTATGACCAAGCCCCAGAAAGCATGAAGAGCCTTGGCACTTCCTATTCAATGACTGCCCTAGGCATTGGGAATTTCCTGAGCACTTTTCTCCTCACAACGGTTTCACATATTACCAAGGAACATGGCCACCAAGGATGGGTTTTGAACAACTTGAATGCTTCTCATCTTGATTACTACTATGCACTTTTGGCCATACTAAACTTGGTCAACTTTGTATTCTTCTTGGTTGTGACCAAGTTCTATGTGTATAGGGCTGAAATTTCAGATTCCATCAAAGTGCTTGAGGAAGAGCTGAAGGAAAAGACAGTCCTTGTGTCAAACCAAGTGATTCCAAGAGATTAA 1785 0.4303 MEEGRILSEDYTQDGTVDLKGKPILKSKTGGWKACSFVVVYEVFERMAYYGISSNLILYLIRKLHQGTVTSANNVTNWVGTIWITPILGAYVADAHLGRYWTFVISSIIYLLGMCLLTLSVSLPSLKPPECHEIDVTKCEKASTLHLAVFYGALYTLAVGTGGTKPNISTIGADQFDDFDSKEKKHKLSFFNWWMFSIFIGTLFANSVLVYIQDNVGWTLGYALPTLGLAISIIIFLAGTPFYRHKLPTGSPFTKMAKVIVAAIRKWKVPVPSDTKELYELDLEEYEKKRRVRIDSTPTLRFLNKACVKTSSSTSAWMLSPVTHVEETKQMLRMIPILVATLIPSAMVAQIGTLFVKQGTTLDRGIGSFNIPPASLSTFVTLSMLICVVLYDRFFVKIMQKLTKNPRGITLLQRVGIGLIIHIVIMVVASITERYRLRVAKEHGLVESGGEVPLSIFILLPQFILMGAADAFLEVAKIEFFYDQAPESMKSLGTSYSMTALGIGNFLSTFLLTTVSHITKEHGHQGWVLNNLNASHLDYYYALLAILNLVNFVFFLVVTKFYVYRAEISDSIKVLEEELKEKTVLVSNQVIPRD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00062 594 CDD MFS_NPF5 32 564 IPR044739 GO:0042937|GO:0042938|GO:0071916
Cca02g00062 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca02g00062 594 SUPERFAMILY MFS general substrate transporter 26 560 IPR036259 -
Cca02g00062 594 Pfam POT family 100 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca02g00062 594 Gene3D MFS general substrate transporter like domains 6 570 IPR036259 -
Cca02g00062 594 PANTHER PEPTIDE TRANSPORTER 15 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00062 Cca-Chr2 994223 1004841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00062 7 578 Organic Solute Cotransporters AT5G46040 67.596 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00062 - - gmx:100813385 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02238 03 43221945 43226424 Cca02g00062 02 994223 1004841 PCT