Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02359 ATGGAAAGAAGAGAAAAAGGTGTGGAGGGAGAGAACAAAAGCGTTGGATTAATGGTGGAAAAGTTGAGGGAAGGGGTTTTGGTGGGGAAAAAGGGAGGGCCTAGTACACCACCACCCACATGGAGACTTGAACTTCCATCTCAGCCCAGTGGTAATGTTAGTGACAAGGTTCAAGAGTTTCTTAACTTTCCCACTTCAACTCTTTCTGCTAGAAACCTCTGTGCCAACCTCTGGGAACTTCTGCCCCACCAACACACCCCACTTCCCAGAATGAACAAGCATGCCACTGGCACCACCCTCCGCCGCCGTTACCGCCATAATCGCCGCCGCCTGCACCATCCTAAGAATACAGCATCTGAAGTGGACAACAACCAATTGGCTGAGCCTCCAGATACCCCTTCTGATTCTGATCAGCCAGGATCAGCTAGTAGCTCAAGAAGGCATTTCGCAGCATCACTTGTTCAACATCGTAGATCAGTAGAAAGAAATGACTCTGCTGTACAGCCTGTATCCCCTGCTTGTTACAGTAGCTCAGCCTCAGTGGACgtagcaccatataaatgtgcagtaacccccACAAGCTCTGTAGACTTCAAAGGTAGGATTGGAGAGTCAAGTTACAACCTTAAAACGTCCACAGAATTACTTAAGGTACTCAACCGTATTTGGAGCCTTGAAGAACAGCAGGCATCAAATATATCAGTAGTGAAAACCTTAAAAATGGAACTAGATCGGTCTCAGGCACGGATAAAGGAGTTACTACGAGATAAACAAATTAGTAGGCAGGAAATGGAGAACTTAGTAAAGCACTTGACAGTGGACAAGCTTATCAGGAAGAACAAAGAACATGATAAAATTAAAGCTGCAGTTCAATCAATCAAGGAAGAGCTAGAAGATGAGAGGAGGTTACGACAACATTCAGAAAACCTGCATCGGAAGCTGGCTAGGGAGCTTTCTGAAGTCAAGTCCTCCTTCTCAGGTTCTTTGAGAAATCTTGAAAGAGAGAGAAAAGCACGAATCCTTTTGGAGAATTTGTGTGATGAGTTCGCCAAAGGAATAAGAGATTATGAACAAGAAGTACATTCTCTTAGACGGAGTTCTGAGAAGGGTCAAGGTCAGGGCCAGGTTAAAGGGAGTAATGGCCTTGATAGGCTTATACTTCATATTTCAGAAGCTTGGCTTGATGAGCGCATGCAGATGAAGCTAGCTCAATCAGACAGTGATCTCATAGAGAGAAATTCAATTGTTGACAAGTTAGGTTTTGATATTGAAACATTTCTTCATGCCAAACGATCGGTTGATTTGAAAAAATACGGCTACTCCTCACCAAAGGAGCTCAAGGAAATTCACCCTTGTCAGCATTCATTGGATTCCTTCCCACTAAAAGAGGCTGGAAGTGCACCTCATAATATGGCTCAGGAAGATTCCATTGACACCGACTTTTTTGAACCAAAAAGGGCTGCTGGTGAAGGACTGCACAAATTCAGCTCCAGATTGCATTCAAACATGGACAGGAACATATCATGGGATGATAATGAGAGTTGTTTTGTGGAGAGGAAATCAAGTGAAATGGAAGAATTACCAAATGAAGAAGAGACCAAACATGATCCACACGAGAGTGATGGACCATGGATCCTGAGAATGAACTCCAGTCACAGGCCAGATAACGTGGTTGGAAACAGTTCCTTGTCATCAGAAGGTGATAAGGTTTATCCTGAGAGCATCTGCAAGGAAGATTCCTATGTCCACTCTGCAGTTACAGCTAATGGTAGTCCTCTAAAACTGTGGAAATCAAAGTTGAATGTTTCAGATTTTGACAAGTCTGAGTCTTCTACCAAATTGCCAAAGGGAGTAAAGGAAAACACATTGATGGCAAAACTCCTTGAAGCAAGATTAGAGGGACAGAAATCTCGCTCTAGAACCAGCAAAAGCACTTCTTGA 1941 0.4297 MERREKGVEGENKSVGLMVEKLREGVLVGKKGGPSTPPPTWRLELPSQPSGNVSDKVQEFLNFPTSTLSARNLCANLWELLPHQHTPLPRMNKHATGTTLRRRYRHNRRRLHHPKNTASEVDNNQLAEPPDTPSDSDQPGSASSSRRHFAASLVQHRRSVERNDSAVQPVSPACYSSSASVDVAPYKCAVTPTSSVDFKGRIGESSYNLKTSTELLKVLNRIWSLEEQQASNISVVKTLKMELDRSQARIKELLRDKQISRQEMENLVKHLTVDKLIRKNKEHDKIKAAVQSIKEELEDERRLRQHSENLHRKLARELSEVKSSFSGSLRNLERERKARILLENLCDEFAKGIRDYEQEVHSLRRSSEKGQGQGQVKGSNGLDRLILHISEAWLDERMQMKLAQSDSDLIERNSIVDKLGFDIETFLHAKRSVDLKKYGYSSPKELKEIHPCQHSLDSFPLKEAGSAPHNMAQEDSIDTDFFEPKRAAGEGLHKFSSRLHSNMDRNISWDDNESCFVERKSSEMEELPNEEETKHDPHESDGPWILRMNSSHRPDNVVGNSSLSSEGDKVYPESICKEDSYVHSAVTANGSPLKLWKSKLNVSDFDKSESSTKLPKGVKENTLMAKLLEARLEGQKSRSRTSKSTS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02359 646 MobiDBLite consensus disorder prediction 96 113 - -
Cca01g02359 646 PANTHER GB|AAF24581.1 9 644 IPR043424 -
Cca01g02359 646 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 9 644 - -
Cca01g02359 646 Coils Coil 236 270 - -
Cca01g02359 646 MobiDBLite consensus disorder prediction 519 542 - -
Cca01g02359 646 MobiDBLite consensus disorder prediction 118 150 - -
Cca01g02359 646 Coils Coil 276 310 - -
Cca01g02359 646 MobiDBLite consensus disorder prediction 87 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02359 Cca-Chr1 52190081 52194704 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02359 - - gmx:100805864 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02359 01 52190081 52194704 Cca01g02359 01 52190081 52194704 ECH
Cca03g03116 03 52628145 52632991 Cca01g02359 01 52190081 52194704 PCT