Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02214 ATGTCATCTTTTGTTGCTCTTCATGGCCTGCATGGCTCTCTTCACCGATCCCAGTTCCTTGGCCAAGACAGCCTCACTCATCTCTACCCTCGCAACAAGGCTTCCACCATTCACAACAAGCCTACAACGGTCCAACCATGTGCCAAATTAGACATGCTACAAATCCTGGGAGGAAGAGGACTATGCAATGGAGAAGAGGGCCTCAAACAAGAGCTGAAGAGGGAAGTTGGTGCCGATGAGAAGACACCACCACCATCATCAGCAAGTGAAAATGAGCAAGAGGACTCAGCAACATTGGCAAGTGTTGCAGAAGATGGTTTTGAGAAGGAACTTTTGGGGCTAACTGGGGGGTTTCCAGGGGGTGAGAAGGGGTTGAAAAGGTTCATTCAGGAAAACCCTCCTCCCAAACCAAGTGCTGGGGGGAAAAGCCTGAAACTTGCACTGTCAAAGAAGCCAAAACCACCAGAACTGCCTCTGTTGCTGCCAGGGATGATTGCCATTGTGAAAAATCCAAACAACCCCTTTTACATGTACTGTGGTATTGTGCAGAGAATCACAGATGGAAAGGCAGGGGTTCTCTTTGAAGGAGGGAACTGGGATAGGTTGATCACGTTCAGGTTGGAAGAACTTGAGCGCAGAGAAAAAGGCCCTCCTTGTAAGAATCCCAAGTCTGCTGTGCTTGAACCGTTTCTTGAAAAGAAATCATAG 708 0.4831 MSSFVALHGLHGSLHRSQFLGQDSLTHLYPRNKASTIHNKPTTVQPCAKLDMLQILGGRGLCNGEEGLKQELKREVGADEKTPPPSSASENEQEDSATLASVAEDGFEKELLGLTGGFPGGEKGLKRFIQENPPPKPSAGGKSLKLALSKKPKPPELPLLLPGMIAIVKNPNNPFYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPCKNPKSAVLEPFLEKKS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02214 235 Gene3D - 155 224 - -
Cca01g02214 235 MobiDBLite consensus disorder prediction 123 148 - -
Cca01g02214 235 MobiDBLite consensus disorder prediction 75 98 - -
Cca01g02214 235 MobiDBLite consensus disorder prediction 213 235 - -
Cca01g02214 235 Pfam NAD(P)H dehydrogenase subunit S 160 211 IPR021659 GO:0009767
Cca01g02214 235 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 234 IPR021659 GO:0009767
Cca01g02214 235 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02214 Cca-Chr1 50275661 50276859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02214 K00345 - gmx:100527145 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01877 07 45772730 45773586 Cca01g02214 01 50275661 50276859 PCT