Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01967 ATGGCAAGCCATTTCGTAGTTCTGGCCCTTCTCATCTCTTGCCACGCCCTGGCTTCGACCAGCGCCGAAGAAACGGGCTACGTGGGCCCAGTGGATCCCAAAACACTGGGCCTATACAAGAAAGACAAGTTTAGCCATTTCCACTTTTACTTCCACGAAACCTTCACCACAGACAACGCCACCACCGTGACGGTGGTGCAGCCCCTCCCCAAGTACAACGGAACCACCTCGTTCGGGTCGGTGTCGATCATGGACAACGCCTTGACCGTAGGACCCAACCGTACCTCCAAGGTGGTCGGAAGAATCGAAGGCTTGGTGGCGGGCACGTCACAATCGGAGTTTAACCTGTTGGTGGTTCTGAACTTCGCCTTAACCGAAGGGAAGTACAATGGAAGCAGCATCGTGGTGTTGGGGAGGAACCGTCTCTCACTCAAGGTTAGGGAGTTGCCGGTGATCGGAGGTACTGGGGTCTTTAGATTTGCCACCGGCTATGCTGAAGCTAACACCGTCTTTATTGAACCCACAGTCAGGTCTACTGTTGAGTATAACATTTATGTTTCGCATTATTGA 570 0.5281 MASHFVVLALLISCHALASTSAEETGYVGPVDPKTLGLYKKDKFSHFHFYFHETFTTDNATTVTVVQPLPKYNGTTSFGSVSIMDNALTVGPNRTSKVVGRIEGLVAGTSQSEFNLLVVLNFALTEGKYNGSSIVVLGRNRLSLKVRELPVIGGTGVFRFATGYAEANTVFIEPTVRSTVEYNIYVSHY 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01967 189 PANTHER DIRIGENT PROTEIN 7 5 188 - -
Cca01g01967 189 Gene3D - 32 187 IPR044859 -
Cca01g01967 189 Pfam Dirigent-like protein 45 186 IPR004265 -
Cca01g01967 189 PANTHER NUCLEOPORIN-RELATED 5 188 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01967 Cca-Chr1 45930495 45931460 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01967 - - gmx:100806935 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01967 01 45930495 45931460 Cca07g01675 07 42255248 42256738 PCT