Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00770 ATGGATGTGAAAAACTCCCTACAGTTAACTAGAAGTGGTACTGGTCCTTATGATGATGATGGACATGCCAAAAGGACTGGAAATTTTAAGAGTGCTGTGGCTCATATCATAACTGCTGTTATTGGTTCTGGTGTTCTTTCTCTTGCATGGAGCACTTCCCTTTTAGGATGGATTGGAGGGCCAGTTGCCTTGCTGTGTTGTGCAATTGTCACATATATTTCTTCATTCCTCCTATCTGATTGTTACAGAACTCCTGATCCTGTCACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAGTTTATCTTGGTAGTAAAAGAACATGGATAGCTGGTTTCCTTCAATTTTTGACTTTGTATGGGACAAGTGTTGCTTATGTAATCACCACAGCAACCAGTCTTGGTGCAATTCTGAGGTCAAATTGTTATCACAAGAAAGGGCATGAGGCTCCTTGTAATTATGGGGGCAATCTGTATATGGCACTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCGGATCTCCATAACATGACATGGGTTTCAGTTGTTGCAGCAATTATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAACAGTCATAAAAAATGGAAGAATTATGGGGAGCTTGACAGGAATACCAACTGATAAAATTGCTGACAAATTTTGGTTAGTCTTCCAAGCACTTGGCGACATTGCCTTTGCCTATCCATATTCCATTCTCCTTCTTGAGATTCAGGACACTCTTGAGTCTCCTCCACCAGAAAATCAAACAATGAAAAAGGCCTCCATGGTTGCAATCTTCATCACAACATTCTTCTACCTGTGCTGCGGATGCTTTGGATATGCAGCTTTTGGAAATGACACACCAGGAAACCTCTTGACAGGGTTTGGCTTTTTTGAGCCTTTCTGGCTCATTGACCTTGCTAATGCTTGCATCATTCTTCATTTGGTTGGAGGATATCAGATTTACAGTCAACCAATATACAGTACTGCTGATAGATGGGCTTCAAGAAGATTCCCCAACAGTGGATTTGTGAACAATTTCTACAAAGTGAAACTGCCTCTTCTGCCTGGTTTTCAGCTAAACCTTTTCAGGTTCTGTTTCAGAACAACCTATGTGATTTCAACCACTGGTTTAGCAATCTTGTTTCCTTACTTCAACCAAGTTCTAGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCAGTAGAGATGTACTTTGTACAGAAGAAAATTGCAGCTTGGAGCAGCAAATGGATTGTCCTCAGAACATTCAGCTTTGCATGCTGTCTTGTGACTGTAATGGGTCTGATTGGCTCACTTGAAGGAATC 1365 0.411 MDVKNSLQLTRSGTGPYDDDGHAKRTGNFKSAVAHIITAVIGSGVLSLAWSTSLLGWIGGPVALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRVYLGSKRTWIAGFLQFLTLYGTSVAYVITTATSLGAILRSNCYHKKGHEAPCNYGGNLYMALFGLVQIVMSFIPDLHNMTWVSVVAAIMSFTYSFIGLGLGIATVIKNGRIMGSLTGIPTDKIADKFWLVFQALGDIAFAYPYSILLLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGNDTPGNLLTGFGFFEPFWLIDLANACIILHLVGGYQIYSQPIYSTADRWASRRFPNSGFVNNFYKVKLPLLPGFQLNLFRFCFRTTYVISTTGLAILFPYFNQVLGVLGAINFWPLAIYFPVEMYFVQKKIAAWSSKWIVLRTFSFACCLVTVMGLIGSLEGI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00770 455 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 454 - -
Cca01g00770 455 Pfam Transmembrane amino acid transporter protein 26 452 IPR013057 -
Cca01g00770 455 MobiDBLite consensus disorder prediction 1 22 - -
Cca01g00770 455 PANTHER OS05G0424000 PROTEIN-RELATED 4 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00770 Cca-Chr1 10177488 10179920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00770 6 443 Organic Solute Cotransporters AT1G77380 53.968 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00770 K24917 - gmx:100818535 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02063 05 40388689 40391509 Cca01g00770 01 10177488 10179920 PCT