Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00769 ATGTATTATTCAAAATCTGAAACTCAGCTACTCTCACAAACTCTGAAACTCAGCTACTCTCAAAGTCAAGTCATCCTTGTACCAGGAACTTTATGGAGTGTTGTAGCTCACATCATTACTGCTGTTATTGGTTCTGGTGTTCTGTCTCTTGCATGGAGTACCTCCCAATTAGGATGGATTGGAGGGCCAATTGTCTTGCTTTGTTTTGCAGCCATCACCTATATTTCTTCTGCCCTCCTTTCTGATTGTTATAGAAGTCCTGATTCTATCACTGGGAAAAGAAGCTACTCATACATGGACGCTGTTAGAGTCAATCTTGGTGAAAGAAGGACATGGTTGGCCGGTTTCCTTCAATTTTTGGTTTTGTATGGGACTAGTTGTGCTTATGTACTTACCACGGCAAATAGTCTAAGGGCAATTCTAAAAGCAAATTGTTATCACAAAGAAGGGCATCAAGCTCCTTGTAGTTATGGGGCTAATTTGTATATGGTGTTGTTTGGACTTGTTGAAATTGTAATGTCATTCATACCAGACCTCCATGACATGTTATGGGTTTCGGTTGTTGCAGCAATTATGTCATTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAAAAGTCATAGGTAACTTTTATTCTTACAATTATGGGAGCATAACAGGAATACCAGCAACTAACATTGCTAATAAGTTATGGTTAGTCTTCCAAGCACTTGGTGACATTGCCTTTGCCTATCCATATGCCTTGCTCCTTCTTGAAATACAGGATACTCTAAGGTCTCATCCACCAGAAAATCGAATCATGAAAAAGGCCTTCATGGTTGCAATAATCATGAAAACATTCTTCTACCTTTGTTGTGGATGCTTTGGATATGCAGCTTTTGGAAATGATACACCAGGAAACCTCTTGATAGGTTTTGGTTTTTATGAGCCTTATTGGCTTGTTGCCTTTGCTAATGTTTGCATTATTCTTCATTTGGTGGGAGGATATCAGATATATAGTCAACCAATATCTGTTGATAGATGGTGCTCAAGAAAAATCCCTAATAATAGATTTGTAAATAAGTCCTACAAAGTGAAATTGCCTTTATTATCCAATTTTGAGTTAAATGTATTTAGGTTTTGTTTTAGAACAACCTATGTGATTTCAACCACTGGAATTGCAATTTTGTTCCCTTACTTCAACCAAGTTTTGGGAGTGTTAGGAGCCATAAACTTTTGGCCATTGGCTATCTACTTTCCAGTAGAGATGTATTTACAACAAAAGAAAATTGGTGGTTGGACTAGAAAATGGATTGTTCTTATTAGGATGTTTAGCTTTGTTTGCTTTGCTGTGACAGTTGTGGGTCTAGTAGGGTCAATTCAAGGAATCATAAGTGAGAAACTTAGCTAA 1395 0.3763 MYYSKSETQLLSQTLKLSYSQSQVILVPGTLWSVVAHIITAVIGSGVLSLAWSTSQLGWIGGPIVLLCFAAITYISSALLSDCYRSPDSITGKRSYSYMDAVRVNLGERRTWLAGFLQFLVLYGTSCAYVLTTANSLRAILKANCYHKEGHQAPCSYGANLYMVLFGLVEIVMSFIPDLHDMLWVSVVAAIMSFTYSFIGLGLGIAKVIGNFYSYNYGSITGIPATNIANKLWLVFQALGDIAFAYPYALLLLEIQDTLRSHPPENRIMKKAFMVAIIMKTFFYLCCGCFGYAAFGNDTPGNLLIGFGFYEPYWLVAFANVCIILHLVGGYQIYSQPISVDRWCSRKIPNNRFVNKSYKVKLPLLSNFELNVFRFCFRTTYVISTTGIAILFPYFNQVLGVLGAINFWPLAIYFPVEMYLQQKKIGGWTRKWIVLIRMFSFVCFAVTVVGLVGSIQGIISEKLS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00769 464 PANTHER AMINO ACID PERMEASE 7-RELATED 19 463 - -
Cca01g00769 464 Pfam Transmembrane amino acid transporter protein 29 459 IPR013057 -
Cca01g00769 464 PANTHER OS05G0424000 PROTEIN-RELATED 19 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00769 Cca-Chr1 10159461 10164776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00769 29 461 Organic Solute Cotransporters AT1G10010 50.801 2.88e-164 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00769 K24917 - gmx:100816934 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00769 01 10159461 10164776 Cca05g02063 05 40388689 40391509 PCT