Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01423 ATGGAAAGCGCATCAGAGCTTGTTGAATTTCCATTGTTATCAACACCAATTGATTCTCACTACAGAGCTTCCACTATTCCTTACAGATTCCCTTCTGATAATCCTCGAAAACCAACTCCAACAGAAATTTCATGGATTGATCTTTTCCTTAATTCCATACCCTCTTTCAAGAAGCGTGCTGAGAGCGATACTTCTGTTTCTGATGCTGCAAATAAAGCTGAAAAATTTGCTCAAAGGTATGCTGATATACTTGAAGATTTCAAGAAAGATCCCGAAAGTCACGGTGGACCGCCCGATTGTATTCTTCTCTGCAGACTTCGTGAGCTAATACTTAGAGAATTGGGATTCATAGATATCTTCAAAAAAGTCAAGGATGAAGAAAATGAAAAAGCCATCTCCCTATTTGAGAATGTTGTTCGAGTTAATGACGCCATTGAAGATGAAGGCAAGCGAATTGAGAATCTAGTTAGGGGCATTTTTGCAGGAAACATATTTGATCTTGGTTCTGCACAGCTTGCAGAGGTTTTCTCTAAGGATGGAATGTCCTTTTTGGCTAGTTGTCAAAATCTCGTTCCTCGACCTTGGGTTATCGACGATCTCGACACTTTCAAAGTGAAATGGAGCAAGAAGTCATGGAAAAAGGTTATCATATTTGTAGATAACTCTGGTGCTGATATCATTTTGGGTATTTTACCATTTGCAAGGGAGCTTCTTCGGCATGGGAGTCAGGTTGTATTGGCTGCAAATGACTTACCTTCCATCAATGATGTTACATATTCTGAGCTAGTTGAAATCATATCAAAGTTAAAGGATGAAGAAGGAAACCTTGTCGGCGTCAGTTCATCAAATCTTTTAATTGCTAACTCTGGCAATGATTTACCTGTTATTGATCTTACAAGAGTGTCACAAGAGCTTGCTTACCTTGCTAGTGATGCAGATCTTGTCGTCTTAGAAGGGATGGGCCGTGGAATAGAAACAAATCTCTATGCTCAATTTAAATGTGATTCCCTTAAGATTGGAATGGTCAAACATCCCGAGGTTGCGCAATTTCTCGGCGGACGTCTATACGATTGCGTATTCAAATACAATGAAGTTTCGAGTTGA 1104 0.3958 MESASELVEFPLLSTPIDSHYRASTIPYRFPSDNPRKPTPTEISWIDLFLNSIPSFKKRAESDTSVSDAANKAEKFAQRYADILEDFKKDPESHGGPPDCILLCRLRELILRELGFIDIFKKVKDEENEKAISLFENVVRVNDAIEDEGKRIENLVRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLDTFKVKWSKKSWKKVIIFVDNSGADIILGILPFARELLRHGSQVVLAANDLPSINDVTYSELVEIISKLKDEEGNLVGVSSSNLLIANSGNDLPVIDLTRVSQELAYLASDADLVVLEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01423 367 Gene3D Uncharacterised protein PF01937, DUF89, domain 2 118 186 - -
Car08g01423 367 PANTHER - 7 365 - -
Car08g01423 367 PANTHER PANTOTHENATE KINASE 7 365 IPR004567 GO:0004594|GO:0005524|GO:0015937
Car08g01423 367 PIRSF UCP030210 7 367 IPR016949 -
Car08g01423 367 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 196 366 - -
Car08g01423 367 Pfam Damage-control phosphatase ARMT1-like domain 52 356 IPR002791 -
Car08g01423 367 Gene3D - 28 117 IPR035073 -
Car08g01423 367 SUPERFAMILY AF1104-like 7 364 IPR036075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01423 Car-Chr8 22810591 22817929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01423 K24854 - gmx:100804454 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01423 08 22810591 22817929 Car05g01733 05 62310028 62322755 ECH
Car08g01423 08 22810591 22817929 Car08g01423 08 22810591 22817929 ECH
Car08g01423 08 22810591 22817929 Car04g00346 04 3569941 3573963 PCT