Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01733 ATGGCTGATTTGGTTGAAGAGGAACAACAACAAGTTATTGGAATTAACGAAGAGGGACAGAATAAGGTGGTAACTGAGTCTGAGGAGAACAACAAACGCTTACATTTAGAGGGTCAGGGAGAAAAAGACATGCCTCCTGCTTCGGGTAATTCCATTCATAGATCAAGTTCAAGGCCTCAACTTGATGTTAGCAAAGCTGAAATTCAATCAAATGTGGAGGATAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCACCTTGCTCTTGATATTGGAGGATCTCTGATAAAGTTGGTATACTTTTCAAGACACGAAGGCCACTCAGATGATGATAAAAGGAAGAAAAGTTTGAAGGAGCGGTTAGGGCTTTCTAATGGTAACAGGAGAAGCTTTCCTATTCTCGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACAGGAAAGATCAATGAATGCTTAGATTTCATTCATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGTCACGTTACTCTGATGCTGCGGCTGATCAAAATGCCATAATTAAGGCTACTGGAGGTGGAGCATACAAGTATACTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCCGGAGCAAATTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACCATAATGATATGTTCCCTTATCTTCTAGTTAATGTTGGATCAGGCGTTAGTATGATCAAGGTTGATGGGGATGGGAAGTTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCCTGGGAAGACTGTTAACAAAGTGCAAAAGCTTTGATGAGTTGCTTGAGCTGAGCCAGAAAGGAGATAACAGAACTATTGACATGCTTGTTGGGGACATTTATGGTGGTTTGGATTATTCTAAGATTGGCCTGTCGGCTTCCACTATTGCTTCAAGTTTTGGAAAAACAATATCCGAAACAAAGGAGCTTGAAAACTACAGACCTGAAGACATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATAGCTTACTTGAATGCATTACGATTTCGGTTGAAGAGAATATTTTTTGGAGGATTTTTTATCAGGGGTCATGCTTATACCATGGACACTATTTCTTTTGCCGTTCAATTCTGGTCTAATGGGGATGCACAAGCAATGTTTTTGCGACATGAAGGCTTTCTTGGAGCTTTAGGTGCATTTATGAGTTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTTCCAATGGGTGCTCCGTATACTGGAGGCAAGATTCATGGCCCGCCACTTGGAGATCTGAATGAGAAGGCGAGTGATAGGAATTGGAAATATCTAATTTGTGCTATTTCGTGGATGGAGAAATTCTTGCAAAAGGGAACTGAAATTACTGCGCCTGTTCCAATGACTCCTGTTGCTGGTACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTGCTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTGCCAACTTTGGAAGTGTTTCCGTTGTTAGCTGACCCAAAATTATATGAGCCCAATACAATTGATCTTGCAGATCCCAGTGAATTAGAATATTGGCTCACTATTTTGTCGGAGCACTTGCCGGATCTTGTGGACAAGGCTGTTGCTAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACTTGTCAAGGTTAATGGAGGAGCCTTCTGCATACGGGAAGTTAGGTTTGGCCAATCTATTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCAGTTTGTTGATGCCTACAGAAGTATAAAGCAGAGGGAAAATGAGGCATCACTTGCTGTTTTGCCTGACTTGTTTGTGGAACTTGATAGCATGGATGAGGAAACGAGGCTGCTTACTCTCATTGAAGGTGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACAATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCGCAGACCTTGGCGGGTGGATGATTTTGATGTCTTCAAAGAAAGAATGTTAAGGACCGGAGACAAGAAAAGGCCCCCTCATAGAAGAGCTTTGCTTTTTGTTGATAATTCAGGTGCTGACATTGTTCTAGGGATGCTTCCACTGGCAAGGGAGCTCCTCCGTCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCGCTTCCTGCTTTAAATGATGTGACAGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGCGAGCTGCTGAAGCTGGAGGCTTGCTTGTTGATGCAATGATTAATACAGACAGCTCTAAAGAAAATTCATCTTCGGTTCCCTTGATGGTTGTTGAAAATGGGTGTGGTAGCCCATGTATAGACTTAAGACAAGTCAGCTCTGAGTTGGCTGCTGCTGCAAAAGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTGCATACTAACCTCTATGCTCAATTTAAATGCGATGCTTTGAAGCTTGCAATGGTGAAAAATCAAAGATTGGCTGAAAAATTGATTAAAGGGAACATATATGACTGTATTTGCAAATACCAGCCTGCTAGTTGA 2769 0.4215 MADLVEEEQQQVIGINEEGQNKVVTESEENNKRLHLEGQGEKDMPPASGNSIHRSSSRPQLDVSKAEIQSNVEDKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEGHSDDDKRKKSLKERLGLSNGNRRSFPILGGRLHFVKFETGKINECLDFIHSKQLHCGGLESRYSDAAADQNAIIKATGGGAYKYTDLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDHNDMFPYLLVNVGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGLDYSKIGLSASTIASSFGKTISETKELENYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVQFWSNGDAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKASDRNWKYLICAISWMEKFLQKGTEITAPVPMTPVAGTTGLGGFEVPLSKGSALRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLADPSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLSRLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLFVELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDVFKERMLRTGDKKRPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTDSSKENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLYAQFKCDALKLAMVKNQRLAEKLIKGNIYDCICKYQPAS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01733 922 SUPERFAMILY Actin-like ATPase domain 89 229 IPR043129 -
Car05g01733 922 Pfam Fumble 90 432 IPR004567 GO:0004594|GO:0005524|GO:0015937
Car05g01733 922 MobiDBLite consensus disorder prediction 49 63 - -
Car05g01733 922 Gene3D - 558 645 IPR035073 -
Car05g01733 922 MobiDBLite consensus disorder prediction 22 40 - -
Car05g01733 922 SUPERFAMILY AF1104-like 539 920 IPR036075 -
Car05g01733 922 PANTHER PANTOTHENATE KINASE 38 844 IPR004567 GO:0004594|GO:0005524|GO:0015937
Car05g01733 922 SUPERFAMILY Actin-like ATPase domain 201 434 IPR043129 -
Car05g01733 922 Pfam Damage-control phosphatase ARMT1-like domain 630 908 IPR002791 -
Car05g01733 922 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 724 920 - -
Car05g01733 922 Gene3D - 82 242 - -
Car05g01733 922 PIRSF PanK_long 44 922 IPR015844 GO:0004594|GO:0015937
Car05g01733 922 Gene3D - 314 423 - -
Car05g01733 922 MobiDBLite consensus disorder prediction 1 63 - -
Car05g01733 922 TIGRFAM panK_eukar: pantothenate kinase 90 433 IPR004567 GO:0004594|GO:0005524|GO:0015937
Car05g01733 922 PANTHER PANTOTHENATE KINASE 2 38 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01733 Car-Chr5 62310028 62322755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01733 K24265 - gmx:100781580 1612.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01423 08 22810591 22817929 Car05g01733 05 62310028 62322755 ECH
Car05g01733 05 62310028 62322755 Car05g01733 05 62310028 62322755 ECH