Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01161 ATGTACGTTGTTCCTCCACCTCAGCAGCGATCTGATCCGCCTTCAGGATCCGCTGATTTGCGTCTTTACCAATCTTGGAAGGGTACTAACAAATTTATTCTTCAGGGTCGATTCATATTTGGACCCGATGCAAGATCGTTGGCGCTGACAATTTTTCTTATTGTTGCTCCGGTTATAGTGTTTTGCATCTACGTTGCCAGAAAACTTATGGATGATTTTTCTGATCACTTTGGGATAACCATAATGGCAGTTGCTGTTGTCTTCACAATTTATATCATAGTTCTTCTCTTGTCAACATCTGGCCGCGACCCTGGCATAATCCCTCGCAATGCACATCCTCCAGAGCTAGATGGTCTTGAAGGCAATCTAGATGTTGTTGGGACTGGTCAAACTCCTCCATTGCGGTTGCCTCGAATCAAGGAGGTTTTGGTCAACGGAATTGCTGTCAAAGTTAAGTATTGTGATACTTGCATGCTCTACAGGCCTCCTCGATGCTCTCACTGCTCAATTTGCAACAACTGTGTAGAGAGGTTTGATCACCACTGCCCTTGGGTTGGGCAGTGCATAGGACTGCGTAATTATCGCTTCTTCTTCATGTTTGTCTTCTCAACTACACTACTTTGTATCTACGTTTTCGCATTTTGTTGGGTCTATATCAGAAGAATCATGAAGTCTGAGGAGACAACAATTTGGAAGGCAATGATCAAAAGTCCAGTCTCCATAGTGTTAATAATTTACACCTTCATATGCATGTGGTTTGTTGGTGGCCTTACTGCCTTTCACCTATATCTGATAAGTACAAATCAGACTACATACGAGAACTTTAGATACCGATATGATCGACGGGACAACCCATATAACAAAGGAGTGTTCAACAACTTCAAAGAGATATTCTTCACCAGCATTCCCGCGTCAAAGAATAATTTCAGGGCAAAGGTGCCAATGGAACCAGTACTACCCACTCGATCAGTGGGTGGAGGCTTTATGAGCCCAAGTATGGGAAAAGCTGTTGATGACATAGAGATGGGAAGGAAAGCTGTGTGGGGTGACATAGACACCGGCATGGATCATTCTGAAGGTCAGTTAAACCATCGCGCGGCTATAAAGGATGGGGAGTTTGGTGAATTGTCTCCGGAAATCAGGATGACTGTAGATGAGACGAGTGACCGTGTTGGAATACATCCAAGGAGATCTAGCTGGGGAAGGAAAAGTGGAAGCTGGGAGATGTCTCCTGAAGTTCTTGCTTTGGCGGCCAGGGTCGGGGAACAAAATCGTACGGGTGGAGGTAGCAGCAGTTTGAGCACTGAGAGCCGACATACGTAG 1323 0.4505 MYVVPPPQQRSDPPSGSADLRLYQSWKGTNKFILQGRFIFGPDARSLALTIFLIVAPVIVFCIYVARKLMDDFSDHFGITIMAVAVVFTIYIIVLLLSTSGRDPGIIPRNAHPPELDGLEGNLDVVGTGQTPPLRLPRIKEVLVNGIAVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVFAFCWVYIRRIMKSEETTIWKAMIKSPVSIVLIIYTFICMWFVGGLTAFHLYLISTNQTTYENFRYRYDRRDNPYNKGVFNNFKEIFFTSIPASKNNFRAKVPMEPVLPTRSVGGGFMSPSMGKAVDDIEMGRKAVWGDIDTGMDHSEGQLNHRAAIKDGEFGELSPEIRMTVDETSDRVGIHPRRSSWGRKSGSWEMSPEVLALAARVGEQNRTGGGSSSLSTESRHT 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01161 440 MobiDBLite consensus disorder prediction 419 440 - -
Car08g01161 440 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 13 435 - -
Car08g01161 440 MobiDBLite consensus disorder prediction 424 440 - -
Car08g01161 440 ProSiteProfiles DHHC domain profile. 152 202 - -
Car08g01161 440 Pfam DHHC palmitoyltransferase 152 276 IPR001594 GO:0016409
Car08g01161 440 PANTHER S-ACYLTRANSFERASE 13 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01161 Car-Chr8 12572021 12577425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01161 80 314 Lipid Metabolism Gene Families AT4G22750 27.200 6.18e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01161 - - gmx:100799812 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01161 08 12572021 12577425 Car04g01108 04 11180954 11185184 PCT