Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01108 ATGGCAGCAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATTTGGAGGGAGGTTGGTATTTGGGCCTGATGCAAGGTCCCTGCTTATTACTTTGTCGCTGATTATTGTTCCAGTTATCATCTTTTGTGTATTTGTAGCAAGGCACCTTCGGCATGAATTTTCTTCATATTATTCAGGATATGCTATTTTAGTAGTGGCGATTCTCTTTACTATCATTGTCCTGGTGCTCCTCTGTCTTACTTCTGCACGTGATCCGGGCATCATTCCGAGGAATTCGCATCCACCAGAAGAAGAGTTTCGTTATGAGTCTTCTGGGGGAGCTGGACAACAAACCCCGACCCTTCAGTTTCCTCGAACAAAAGAAGTAATGGTCAATGGCCTTCCTGTAAGGGTGAAATATTGTGAAACTTGTATGCTGTATCGTCCTCCTCGTTGCTCGCATTGCTCCATCTGCAACAACTGTGTTGAGCGTTTTGATCATCATTGCCCTTGGGTAGGGCAATGCATCGGCCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCTGCAACTATTCTGTGCATCTATGTGTTTTCCCTCTCAGCATTTTACATCAAGGTTCTGATGGATAATAATGATAACGGCACAGTGTGGAAGGCGATTAAAGAATCCCCTGCGTCTGTGATATTAATGGCTTATTGTTTCATCTCTCTGTGGTTTGTGGGTGGACTAACCGGTTTTCATTTGTACCTTATAGGCACAAACCAGACTACCTATGAAAACTTCCGGTACAGAGCTGATGGCAGGATCAATGTTTTTAATCAGGGTTGTTTAAATAATTTTCTGGAAGTGTTTTGCAAAGAAATAAATCCCTCGAGGAACAATTTCAGGGGTTTTGTTCAAGAGGAGGTACAAAGGCCATTGGCTCCAGTCTTTGCCCGGGGCCGTGAACCAGATGACTTAGGTGGAGATCGCCGTCCTAAGGTTGAAGCTGATCTAGATATCGGTGAAGATCTATTGAAGATATCACAACGTAAGAACATTGAAGAACTCGACGAGGAGATTCGCAGCAGAGGGAGCAATGGTGCACCACATAATACAACTGAACCTGATTCAATTTTGTCATCAGATCATCGAGCTACCACAATACAATCCAACGCTAGGCACTCGAGTTGGGATAGGAGTGGAAACTGGGAAATTGCACAGGATGTCTTTGCCAATTCAAATGTCACCGAAAGCAGGAGTTATGTCACATCAAAGGAAATGCGCCAATGA 1269 0.4358 MAAKRVYQVWKGSNKFIFGGRLVFGPDARSLLITLSLIIVPVIIFCVFVARHLRHEFSSYYSGYAILVVAILFTIIVLVLLCLTSARDPGIIPRNSHPPEEEFRYESSGGAGQQTPTLQFPRTKEVMVNGLPVRVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSLSAFYIKVLMDNNDNGTVWKAIKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADGRINVFNQGCLNNFLEVFCKEINPSRNNFRGFVQEEVQRPLAPVFARGREPDDLGGDRRPKVEADLDIGEDLLKISQRKNIEELDEEIRSRGSNGAPHNTTEPDSILSSDHRATTIQSNARHSSWDRSGNWEIAQDVFANSNVTESRSYVTSKEMRQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01108 422 ProSiteProfiles DHHC domain profile. 136 186 - -
Car04g01108 422 PANTHER S-ACYLTRANSFERASE 6 421 - -
Car04g01108 422 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 421 - -
Car04g01108 422 Pfam DHHC palmitoyltransferase 136 261 IPR001594 GO:0016409
Car04g01108 422 MobiDBLite consensus disorder prediction 353 389 - -
Car04g01108 422 MobiDBLite consensus disorder prediction 93 114 - -
Car04g01108 422 MobiDBLite consensus disorder prediction 358 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01108 Car-Chr4 11180954 11185184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01108 65 283 Lipid Metabolism Gene Families AT4G22750 29.075 1.75e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01108 K16675 - gmx:100820208 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01108 04 11180954 11185184 Car04g01108 04 11180954 11185184 ECH
Car08g01161 08 12572021 12577425 Car04g01108 04 11180954 11185184 PCT