Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01105 ATGGAAGATAATAAAGATCATGATTTCTTTTCACACAAATTCCCAACAACTTCTCAGGTGGTGGAAGAGCTGAAGGAGCTTTGGGGGATGGCTTTACCAATAACAGCTATGAACATGTTGGTTTTTGTGAGAGCAGTTGTTTCTGTTCTGTTTCTTGGTAGACTTGGTAGTTTAGAGCTAGCTGGTGGTGCACTGTCTATAGGTTTCACAAACATAACAGGGTATTCTGTTCTTGTTGGTCTTGCATCAGGTCTTGAACCTGTTTGTAGCCAAGCTTTTGGTAGCAAAAATTGGGAACTTCTTTCCCTTTCATTACAAAGAATGGTTCTCATACTTTTAATGGCAATTGTACCCATAAGTCTTCTATGGATAAATCTTGAAAGAATAATGCTTTTCATGGGACAAGACAGTAGTATAACTGAAATGGCATCCATTTACTGTTTCTATTCTCTCCCAGACCTTTTAACAAACACCTTGTTGCAACCTTTGAGGGTATTTTTAAGGTCACAAAAAGTGACAAAACCAATGATGTATTGTTCATTGGTGGCTGTTGTTTTTCATGTTCCTTTGAATTATTTGTTGGTTGTAGTGATGGAACTTGGTGTACCAGGTGTGGCTATGGCTTCTGTTTTGACAAACATGAACATGGTAGTGTTAATGGCAGGGTATGTTTGTATTTTTAGAAAAAATGAAATGATGTTGAGGTGGGGTTGTGGTAATGGTGGATTAATGATAGTGTATGATGGTTTAGGACAGTTGATGAAATTAGCTGTACCTAGTTGTCTTATGATATGTTTGGAATGGTGGTGGTATGAGATTGTTACTGTTATGGCTGGTTATTTACCAAATCCAACTTTGGCTGTTGCTGCTACTGGGATTTTGATTCAGACAACTAGTATGATGTACACTGTCCCCATGGCACTTGCAGGATGTGTTTCTGCCAGGGTAGGGAATGAGCTTGGAGCTGGTAAACCATACAAGGCAAAACTCGCAGCCATGGTTGCATTAGGATGTGCTTTCGTAATGGGCTTCATCAATGTGGCATGGACTGTGATTCTTAGATATGGGTGGGCCGCGTTGTTTACAAATGATGAGCCCGTAAAAGCTTTGGTTGCATCGGTCATGCCAATCATGGGCCTATGCGAGCTTGGAAACTGCCCACAAACAACGGGATGTGGCATCCTTCGTGGCACGGCACGGCCCGTCATTGGTGCTAACATTAATTTGGGTTCATTTTACTTTGTGGGTACACCGGTTGCTGTGGGCTTGGCATTTTGGTTCAAAATTGGGTTTAGTGGGCTTTGGTTTGGGCTTTTGTCTGCGCAGGTGGCATGTGCTTTATCACTTCTATATGTTGTTGTGGTACGTACGGATTGGGAAGCAGAGGCTTTGAAGGCAGAGAAGCTAACAAGAGGGGTAGAGATGGGAAATTGGAACGGAAGTAAGAATAAAGACAAAATGATAGATGATGAGGAAAACAAGGGTTTGTTGGTGTATGGAAATGGGAACAAAATTGACATTTGA 1524 0.414 MEDNKDHDFFSHKFPTTSQVVEELKELWGMALPITAMNMLVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLASGLEPVCSQAFGSKNWELLSLSLQRMVLILLMAIVPISLLWINLERIMLFMGQDSSITEMASIYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVVFHVPLNYLLVVVMELGVPGVAMASVLTNMNMVVLMAGYVCIFRKNEMMLRWGCGNGGLMIVYDGLGQLMKLAVPSCLMICLEWWWYEIVTVMAGYLPNPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAMVALGCAFVMGFINVAWTVILRYGWAALFTNDEPVKALVASVMPIMGLCELGNCPQTTGCGILRGTARPVIGANINLGSFYFVGTPVAVGLAFWFKIGFSGLWFGLLSAQVACALSLLYVVVVRTDWEAEALKAEKLTRGVEMGNWNGSKNKDKMIDDEENKGLLVYGNGNKIDI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01105 507 CDD MATE_eukaryotic 23 465 IPR045069 GO:0042910|GO:1990961
Car08g01105 507 PANTHER PROTEIN DETOXIFICATION 13 480 - -
Car08g01105 507 TIGRFAM matE: MATE efflux family protein 33 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01105 507 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01105 507 Pfam MatE 259 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01105 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01105 Car-Chr8 11173220 11177752 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01105 K03327 - gmx:100800364 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01171 07 10512493 10514093 Car08g01105 08 11173220 11177752 PCT