Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01171 ATGACGAAATTTGAATCATCTACAACAGCTGCATCGTTAGGTCAATTCCCCGTACCTTTTAGTGAAAGGAATGAGAGTGAACCAAATATATTAGTAGAGGAGCCAAACATGTTAACCACATTGATTCCAAAATCCCCAACATGTGAAGAAAATACCCATTTGTCACTTGTCCTGAATGAAGCAAAATACATATCCAATATATCATTGTCTATGGTTTTAACAGCTCTAATACTCTATTCTCGCTCCATGATCTCAATGCTCTTTCTTGGTCGTCTCGGCGAGCTTTCTCTCGCCGGTGGCTCACTCGCCATTGGATTCGCCAACATCACTGGTTACTCTGTTCTCTCTGGCCTTGCAATGGGGATAGAACCTCTTTGTGGTCAAGCTTTTGGAGCCAAAAGATTCAAACTTCTTGGTCTTGCAATGCAAAAGATGGTACTTCTTCTACTTTTTACTTCATTTTTCATTGCATTGTTATGGCTCAACATGAAAAAAATATTGATTTTTTGTAATCAACAAGAGGACATAGCCAATGAAGCACAATTCTACATTTTTTATTCTCTTCCTGATTTAATTATACAATCATTGTTACACCCTTTGAGAATCTACCTTCGAAGCCAATCAATAACATTTCCTCTCACATGTTGTGCAACACTCTCTATTCTTCTTCATGTTCCTATCAACTACTTTCTTGTTTCTATGCTCAAGCTTGGAATCAAAGGTGTTGCTTTAAGCTCTGTTTGGACCAATTTCAACTTCGTTGGTTCGTTGATTATCTACATTATGGTTTCGGGAACACACAAGAGAACATGGAATGGTATTTCTTGGAGGTGTTTAAAAGGTTGGAACACACTATTGAACCTTGCAATTCCTAGTTGTGTTTCGGTTTGTCTTGAATGGTGGTGGTATGAAATAATGACTTTACTTTGTGGGTTAATGATGAATCCACATGCAAGTGTTGCGTCCATGGGTGTTTTGATACAAACAACATCGTTGATATATATTTTTCCATCGTCTCTAAGTTTTGGAGTGTCAACAAGAGTTGGGAATCAGCTTGGTGCGGGGAATTCGCACCAAGCAAAAACCGCAGCTATTGTTGGGGTTTGTTTTAGTTTTGTTTTGGGTTTTTTTGCTTTTGTGTTTGCTTTTTGGGTGAGGAATGTTTGGGCTAGTATGTTCACAAATGATGTAGATATAATTGGTTTGACAAAAATAGTGTTGCCTATTGTTGGGCTTTGTGAGTTTGGAAATTGTCCACAAACTACGGTTTGTGGGGTTTTGAGGGGAAGTGCGAGGCCAAAATTGGGAGCAAATATAAATTTGTGTTGTTTTTATGTTGTGGGAATGCCAGTTGGTGTTTGGTTGAGTTTTTTTGGAGGATTTGATTTTGAAGGGTTGTGGATTGGAATGTTGGCAGCACAAGGATGTTGTATGATGGCAATGATGTTTGTTTTGGTACATACAAATTGGGATGGACAAGTTCTAAGAGCTAAGGAGCTTACTTCATCTGATCATGGGGAAGAGGAAATATTACAACAAGATGAGGAATAA 1551 0.3836 MTKFESSTTAASLGQFPVPFSERNESEPNILVEEPNMLTTLIPKSPTCEENTHLSLVLNEAKYISNISLSMVLTALILYSRSMISMLFLGRLGELSLAGGSLAIGFANITGYSVLSGLAMGIEPLCGQAFGAKRFKLLGLAMQKMVLLLLFTSFFIALLWLNMKKILIFCNQQEDIANEAQFYIFYSLPDLIIQSLLHPLRIYLRSQSITFPLTCCATLSILLHVPINYFLVSMLKLGIKGVALSSVWTNFNFVGSLIIYIMVSGTHKRTWNGISWRCLKGWNTLLNLAIPSCVSVCLEWWWYEIMTLLCGLMMNPHASVASMGVLIQTTSLIYIFPSSLSFGVSTRVGNQLGAGNSHQAKTAAIVGVCFSFVLGFFAFVFAFWVRNVWASMFTNDVDIIGLTKIVLPIVGLCEFGNCPQTTVCGVLRGSARPKLGANINLCCFYVVGMPVGVWLSFFGGFDFEGLWIGMLAAQGCCMMAMMFVLVHTNWDGQVLRAKELTSSDHGEEEILQQDEE 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01171 516 PANTHER MULTIDRUG RESISTANCE PROTEIN 50 505 - -
Car07g01171 516 TIGRFAM matE: MATE efflux family protein 73 467 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car07g01171 516 Pfam MatE 291 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car07g01171 516 Pfam MatE 72 230 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car07g01171 516 PANTHER PROTEIN DETOXIFICATION 49 50 505 - -
Car07g01171 516 CDD MATE_eukaryotic 60 494 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01171 Car-Chr7 10512493 10514093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01171 K03327 - gmx:100795165 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01171 07 10512493 10514093 Car07g01171 07 10512493 10514093 ECH
Car07g01171 07 10512493 10514093 Car08g01105 08 11173220 11177752 PCT