Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00603 ATGAAGCGAACTCGATCTCAAACCAAAGCAGATTCCAATCCAAATGACGATCCACAACCCCCAATCAAAACCCTAACCTCTTCAAAAATTCCCTTCCCCGCTCGAAAAATCCCAAAACTAACCCCCAAAAACAAACAACACCTTCCCCTTTCAACAATCGCAAAACCATTAACATCACAAACCGAAATCGAAACTGCTCTGAACCACCTTCGTTCATCCGATCCCCTCTTAACCACCATCATCAACACTTTCCCCTCTCCAAATTTCACAAAGCAAATCACACCTTTCTTCTCCCTCATAAAAAGCATAATCTCCCAACAACTCTCCAACAAAGCATCATCATCAATCGAAACGCGTTTCGTCTCACTATGCGGCGGCCAATCTTCCATCCTCCCCGACGTCGTTTTATCTCTCTCCCCACAGCAGCTTCGCCACGTCGGCATCTCGGGACGGAAAGCATCTTACATCCATGACCTTTCCACAAAGTACGCTAATGGTTTTTTGTCGGATTCTTCAATTTTGGAAATGGACGATGAAACACTTTTTAAGAAACTAACTTCGGTTAAAGGAATTGGGCCTTGGTCGGTTGATATGTTCATGATTTTTACACTTCACAGGCCTGATGTTTTACCTGTTGGTGACCTTGTTGTGAGGAGAGGTGTGGAGCGGTTGTATGGTCTTAAGGGTTTGCCTTCACCTTCAGAAATGGAATTACTGTGTCATAAATGGAAGCCTTATAGGTCTATTGGGTCTTGGTATATGTATAGGTTTGTTGAAGCTAAAGAGGTTATGCCTCACCAAGTTAACTAA 810 0.4346 MKRTRSQTKADSNPNDDPQPPIKTLTSSKIPFPARKIPKLTPKNKQHLPLSTIAKPLTSQTEIETALNHLRSSDPLLTTIINTFPSPNFTKQITPFFSLIKSIISQQLSNKASSSIETRFVSLCGGQSSILPDVVLSLSPQQLRHVGISGRKASYIHDLSTKYANGFLSDSSILEMDDETLFKKLTSVKGIGPWSVDMFMIFTLHRPDVLPVGDLVVRRGVERLYGLKGLPSPSEMELLCHKWKPYRSIGSWYMYRFVEAKEVMPHQVN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00603 269 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 1 265 - -
Car08g00603 269 Gene3D - 68 256 - -
Car08g00603 269 MobiDBLite consensus disorder prediction 11 26 - -
Car08g00603 269 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 265 - -
Car08g00603 269 Pfam HhH-GPD superfamily base excision DNA repair protein 100 244 IPR003265 GO:0006284
Car08g00603 269 SUPERFAMILY DNA-glycosylase 89 257 IPR011257 GO:0003824|GO:0006281
Car08g00603 269 CDD ENDO3c 99 257 IPR003265 GO:0006284
Car08g00603 269 Gene3D Hypothetical protein; domain 2 93 206 - -
Car08g00603 269 MobiDBLite consensus disorder prediction 1 45 - -
Car08g00603 269 SMART endo3end 104 259 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00603 Car-Chr8 5185671 5186900 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00603 K01247 - mnt:21403226 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00603 08 5185671 5186900 Car08g00603 08 5185671 5186900 ECH
Car05g03198 05 76822663 76827347 Car08g00603 08 5185671 5186900 ECH