Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00601 ATGGTGAACATAATGACAGTACTTTGGTCATTGGCTAGTTGGGCAGTGAAGATGGCGGGTTTGAAGCTTTACACAGTGGAGATAGAGCCAGGTACACTAATGAGATTCTGGGTCCCTTCCGAAACCATTTCAAAGCCCAAGCCCAAGCCCATTTCAAAACCAACCAAGCGAGTAGTGGTTCTAATCCACGGCTTCTGCGGCGATGGACTTTTCACATGGCAGTTCCAAATCAGCGCTTTGGTAAAAAACTACTCTGTTTACGTTCCAGATTTAATTTTCTTCGGCGGCTCCACAACCGATAAGCCGGATCGGTCACCGGCTTTTCAAGCCGAGTGTTTGGCAGCTGGGTTAAGGAAACTCGGGGTGGAGAAGTGTGTTCTGGTTGGATTTAGTTACGGAGGAATGGTGGCTTTTAAAATGGCTGAGCTGTATAGTGAGCTTGTTGAAGCCGTGGTTGTAAGTGGCTCAATTTTGGCTATAAAGGAGTCTATGATAAATACGGCAGTGGAAGAAGCTGGATTTTGTTCTTGTAAGGAAATGTTAATGCCATATACTGTTGAGGGAGTGAGGACACTTCTTTCTGTTGGTATGCACAACAAATTTTGGTTACCCAACTTTGCACTCAACGATTTTCTTAAGGTAATGTTCTTTAATAGGAAAGAGCGAGGTGAGCTATTAGAAGCCTTAGTCATTAGCTACAAAGACATTAACATCCCGAAATTCCCACAGCAAATACTTCTTTTATGGGGTGAGAAAGACAAAATTTTCAAACAAGAAGTTGCACAGGACATACAAGAGATACTGGGAAATAATGCAACATATGAAGGGATAAAAAATGCCGGTCACTTGGTTCATCTCGAGCGACCTTGTGTTTATAATAAGTGCCTTAAGCAGTTTCTTTCTTCTATTAAGCTTGGTGAAAGAAAATAA 930 0.4226 MVNIMTVLWSLASWAVKMAGLKLYTVEIEPGTLMRFWVPSETISKPKPKPISKPTKRVVVLIHGFCGDGLFTWQFQISALVKNYSVYVPDLIFFGGSTTDKPDRSPAFQAECLAAGLRKLGVEKCVLVGFSYGGMVAFKMAELYSELVEAVVVSGSILAIKESMINTAVEEAGFCSCKEMLMPYTVEGVRTLLSVGMHNKFWLPNFALNDFLKVMFFNRKERGELLEALVISYKDINIPKFPQQILLLWGEKDKIFKQEVAQDIQEILGNNATYEGIKNAGHLVHLERPCVYNKCLKQFLSSIKLGERK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00601 309 Pfam alpha/beta hydrolase fold 58 158 IPR000073 -
Car08g00601 309 PANTHER SI:DKEY-122A22.2 2 300 - -
Car08g00601 309 Gene3D alpha/beta hydrolase 49 305 IPR029058 -
Car08g00601 309 SUPERFAMILY alpha/beta-Hydrolases 55 302 IPR029058 -
Car08g00601 309 PRINTS Alpha/beta hydrolase fold signature 83 98 IPR000073 -
Car08g00601 309 PRINTS Alpha/beta hydrolase fold signature 127 140 IPR000073 -
Car08g00601 309 PRINTS Alpha/beta hydrolase fold signature 245 259 IPR000073 -
Car08g00601 309 PANTHER EPOXIDE HYDROLASE 4-LIKE 2 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00601 Car-Chr8 5172913 5180390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00601 59 307 Miscellaneous Gene Families AT1G80280 22.414 2.87e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00601 - - mtr:MTR_5g020250 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00601 08 5172913 5180390 Car08g00601 08 5172913 5180390 ECH
Car08g00601 08 5172913 5180390 Car07g01541 07 15197848 15201842 PCT