Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01541 ATGGTGAATCTCGTGGCAGCACAAAAACCATTGATGCATGTGCTAATGAAAATGGCAGGAATAAGGCCCTACACGGTGGAAATAGAATCAGGAACAGTAATGACATTCTGGGTACCTTCAGAAACAATAACAAAGCCTAAGAAAAAACAAGAAAAGCCCAAAATAATAGCGAAGCCCAATAAGCCCGTAGTGGTTCTAATACACGGTTTCGCAGCGGAAGGAATAGTGACGTGGCAGTTTCAAGTAGGCGCGTTGACAAAAAAGTACGCTGTTTATGTTCCGGATCTACTATTCTTCGGAGGGTCCGTAACGGATAAAGCGGAAAGGTCACCGAGTTTTCAAGCAGAGTGTTTGGCGACAGGTTTAAGGAAACTTGGTGTTGAAAAGTGTATTGTTGTTGGTTTTAGTTATGGTGGAATGGTGGCTTTTAAAATGGCTGAGATGTACCCTGAATTGGTTGAAGCTATGGTTATATCTGGATCTATATTTGCTATGACTGATTCAATTAGTGTTAGTACAATGAAAGAACTTGGTTTTTCTTCTTCTTCTGAACTTTTGTTGCCTAATTCTGTTAAGGGTCTTAAGGCCCTTTTGTCTGTTGCTGCTTATAAAAAGTTTTGGTTCCCTGATCGTTTACATAAAGACTTTCTTCGGGTGATGTTCACAAATAGGAAGGAGAGAGGTGAGTTATTAGATGGCTTAGTTATTAGCAATAGAGATATAGACATCCCAAGTTTCACACAGAGGATACATCTTCTATGGGGCGAGAATGATCAAATTTTCAAATCGGAGCTTGCTCAAAATATGAAAGAGCAACTAGGAGATGGCACAACATTTGAAGGCATAAAGAAAGCTGGTCACCTTGTTCATTTGGAGCGACCATGTGTCTACAATAGATGCCTCAAGCATTTTATTGCTTCCTTCTTGGCGTCAAATGAAGCCAAACAAATAACTTGA 957 0.4002 MVNLVAAQKPLMHVLMKMAGIRPYTVEIESGTVMTFWVPSETITKPKKKQEKPKIIAKPNKPVVVLIHGFAAEGIVTWQFQVGALTKKYAVYVPDLLFFGGSVTDKAERSPSFQAECLATGLRKLGVEKCIVVGFSYGGMVAFKMAEMYPELVEAMVISGSIFAMTDSISVSTMKELGFSSSSELLLPNSVKGLKALLSVAAYKKFWFPDRLHKDFLRVMFTNRKERGELLDGLVISNRDIDIPSFTQRIHLLWGENDQIFKSELAQNMKEQLGDGTTFEGIKKAGHLVHLERPCVYNRCLKHFIASFLASNEAKQIT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01541 318 PANTHER SI:DKEY-122A22.2 2 308 - -
Car07g01541 318 Pfam alpha/beta hydrolase fold 62 171 IPR000073 -
Car07g01541 318 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Car07g01541 318 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Car07g01541 318 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Car07g01541 318 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Car07g01541 318 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Car07g01541 318 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Car07g01541 318 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Car07g01541 318 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Car07g01541 318 SUPERFAMILY alpha/beta-Hydrolases 59 306 IPR029058 -
Car07g01541 318 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 308 - -
Car07g01541 318 Gene3D alpha/beta hydrolase 17 312 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01541 Car-Chr7 15197848 15201842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01541 62 171 Acyl Lipid Metabolism Gene Families AT4G15960 28.696 1.34e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01541 - - gmx:100816070 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00601 08 5172913 5180390 Car07g01541 07 15197848 15201842 PCT