Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00578 ATGTATTTGGGAAAAGAAACAAGTGGAAATGGTCTCAACAAGTACGCTTGTGCTTGTGTGATGGCAGCTACTATTATCTCTGCCATATTTGGTTATATTACTGGAGTGATGGCAGGAGCACTGTTATTCATAAAAGAAGAACTTGAAATAAGTGACATGCAAGTTCAACTTGTAGCAGGAATCTTAAATGTGTGTGCATTACCAGCATGCATGGTTGCTGGAAGAACATCTGATTACATAGGACGACGCTACACAATAATTCTATCCGCAGTAATATTCTTTATAGGCTCAATTTTAATGGGCTATGGTCCATCTTTTCCAATTTTGATGGTTGGAAGATGCACTGCAGGATTTGGTGTTGGTTTTGCACTTATCATAGCACCTATTTATAGTGCTGAAATTTCATCACCTTCTTATAGAGGTTTTCTAACTTCTCTACCAGATGTTTCACTCAATGTAGGTTTTTTACTTGGTTATGTCTCAAATTATTTCCTAGGAAAATTGTCTCTAAGACTTGGATGGAGAATTATGCTTGCAATTCCTTCAATTCCTTCATTTGGGTTAGTGATTTTAATGTTGAAATTAGTTGAGTCTCCAAGATGGTTGGTTATGCAAGGTAGATTAGGTGATGCTAGGAAAGTTCTTATGTTAATTTCTAATTCAAAAGAAGAAGCAGAACAAAGATTGAAGGAAATAAAAGTTGCTGTTGGAATTGATGAAAAGTGTGACCAAAACATAGTTCATGTTCCACAAAAAACTCGTAGTGGTGGTGGAGCTTTACAAGAAATGTTTTGTAAACCTTCAAAACCTGTTAAAAAGATACTAATTGCAGCTATTGGTGTTCATGTTTTTCAACAAATTTGTGGAATTGAAGGAATTTTGTTATATAGTCCAAGAATTTTTGAAAAAATAGGAATTTCTGAAAAAAGTACATTACTTTTAGCAACGGTTGGTATAGGAATAAGCCAATCTTTATTCACATTTTTATCATCATTTTTATTGGACAAAATTGGGAGAAGAATTTTATTGTTGGTTAGTTCAGGAGGTGTGGTTGTGAGTTGGTTAGGATTAAGTGTTTGTTCAGCTATATTGGAAAATTCTCAAGATGAAGAACCATTATGGGCCATAACTTTGGTTATTATTGCTATATACATTTTGGTTGCTTTTGTTGCTATTGGAATTGGGCCTGTGACATGGGTTTATAGCTCTGAAATATTTCCACTAAGGTTAAGAGCCCAAGGTCTTGGTATTTGTGTGGCTGTAAATAGGGTTACAAATGTGGCTGTGGTTTCTAGTTTCATTTCAATTTTTAAAACCATTACATTGGGTGGGACTTTCTTTAGTCTTGTGGGTATTAATGTTTTGGCTTGGTGGTTTTATTACTCTTTCTTGCCTGAAACTAAAGGAAGATCATTAGAAGATATGGAGACAATATTTGGGGAAGATTCCAAGGAAGAGGTACAAATGAAGATTCAATGCAACCATGCATAG 1491 0.3488 MYLGKETSGNGLNKYACACVMAATIISAIFGYITGVMAGALLFIKEELEISDMQVQLVAGILNVCALPACMVAGRTSDYIGRRYTIILSAVIFFIGSILMGYGPSFPILMVGRCTAGFGVGFALIIAPIYSAEISSPSYRGFLTSLPDVSLNVGFLLGYVSNYFLGKLSLRLGWRIMLAIPSIPSFGLVILMLKLVESPRWLVMQGRLGDARKVLMLISNSKEEAEQRLKEIKVAVGIDEKCDQNIVHVPQKTRSGGGALQEMFCKPSKPVKKILIAAIGVHVFQQICGIEGILLYSPRIFEKIGISEKSTLLLATVGIGISQSLFTFLSSFLLDKIGRRILLLVSSGGVVVSWLGLSVCSAILENSQDEEPLWAITLVIIAIYILVAFVAIGIGPVTWVYSSEIFPLRLRAQGLGICVAVNRVTNVAVVSSFISIFKTITLGGTFFSLVGINVLAWWFYYSFLPETKGRSLEDMETIFGEDSKEEVQMKIQCNHA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00578 496 ProSitePatterns Sugar transport proteins signature 1. 73 90 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car08g00578 496 ProSitePatterns Sugar transport proteins signature 1. 330 347 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car08g00578 496 Pfam Sugar (and other) transporter 21 479 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car08g00578 496 SUPERFAMILY MFS general substrate transporter 13 476 IPR036259 -
Car08g00578 496 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 9 484 IPR045262 GO:0015144
Car08g00578 496 Gene3D MFS general substrate transporter like domains 9 483 IPR036259 -
Car08g00578 496 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 9 484 - -
Car08g00578 496 Coils Coil 215 235 - -
Car08g00578 496 PRINTS Sugar transporter signature 27 37 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car08g00578 496 PRINTS Sugar transporter signature 110 129 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car08g00578 496 PRINTS Sugar transporter signature 285 295 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car08g00578 496 PRINTS Sugar transporter signature 380 401 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car08g00578 496 PRINTS Sugar transporter signature 403 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car08g00578 496 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car08g00578 496 ProSiteProfiles Major facilitator superfamily (MFS) profile. 19 468 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00578 Car-Chr8 4928747 4932418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00578 11 485 Organic Solute Cotransporters AT4G36670 51.158 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00578 - - gmx:100786322 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00578 08 4928747 4932418 Car08g00578 08 4928747 4932418 ECH
Car06g03757 06 69173539 69175960 Car08g00578 08 4928747 4932418 ECH