Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03757 ATGAGTGAGGGTAAGGTAGTTGAAGCAAAAGCTCCACAAACTCTTCACGATTTTGATCCTCAAAAGAAGCCCAAACGTAACATGTATGCTTTTGCTTGTGCTATGTTGGCCTCCATGACTTCCATTTTGCTTGGCTACGATATTGGCGTTATGAGTGGAGCAGCCATTTACATACAAAGAGATCTGAAAGTATCGGACGTACAAATCGAGATTCTGTTAGGAATCATTAACATCTACTCTCTCATTGGATCATGCCTCGCCGGTAGAACCTCCGATTGGATCGGCCGTCGTTACACCATTGTTTTTGCTGGTGTTATCTTTTTCGCCGGAGCTTTACTCATGGGTTTCTCACCCAACTACTCATTTCTCATGTTTGGTCGTTTCGTCGCCGGAGTTGGTATCGGCTACGCCCTCATGATTGCCCCTGTCTACACCGCCGAAGTCTCCCCCGCTTCCTCTCGCGGCTTTCTCACTTCATTCCCGGAGGTTTTCATAAACGGTGGGATATTAGTTGGATATATATCAAACTATGCATTTTCGAAATTGTCACTTCATTTAGGTTGGAGGATGATGCTTGGAGTAGGTGCAGTTCCATCTGTAATCCTAACCGTTGGAGTTTTAGCTATGCCAGAGTCACCAAGATGGCTCGTAATGAGAGGTCGTTTAGGAGACGCAATAAAAGTTCTCAACAAAACTTCAGATTCAAAAGAAGAGGCTCAACTAAGGTTAGCCGAGATTAAACGAGCCGCTGGTATTCCCGAAGATTGCAATGACGACGTCGTTCAAGTAACTAACAAAAACACGGGTGATGGTGTATGGAAAGAGCTTTTCCTTTATCCTACACCCGCGGTTCGTCATATCGTTATAGCTGCTCTCGGTATTCACTTTTTTCAACAAGCATCGGGTGTAGACGCTGTCGTTTTGTACAGTCCAAAAATCTTCCAAAAGGCTGGGATCAAGGATGATACACATCAACTTCTTGCAACCATAGCCGTTGGATTTGTAAAGACCATCTTCATCTTAGTGGCTACTTTTATGTTAGATCGCGTTGGTCGTCGTCCGTTGTTACTAACCAGTGTTGGCGGCATGGTACTCTCTCTTCTCACGCTTGCTGTCAGCCTCACGATTATTGATCACTCAGAAACGAAGTTGATGTGGGCCGTTGGATTGAGTATAGCAACCGTTTTATCTTATGTTGCAACTTTCTCAATAGGTGCGGGACCCATCACGTGGGTGTATAGTTCCGAAATATTTCCTTTGAGGTTGAGAGCGCAGGGTGCGGCTATGGGAGTTGTGGTGAATAGGGTAACAAGTGGGGTTATTTCAATGACTTTTTTATCCTTATCTAAAGCGATTACCATTGGTGGAGCTTTTTTCCTTTTTGGAGCTATAGCTGCAGCTGGCTGGGTATTCTTTTATACTATGCTTCCTGAAACACAGGGTAAAACACTTGAAGAAATGGAAGGGTCTTTTGGTAAATTTGGGAGAAAATCTCAAAGTTATGATAGTACTCATAACGAACTTGACAACGGCAAGGATCAAGTTGCACAAGTCCAGCTAGGGACCAATGTGTCTTCTTAG 1581 0.4409 MSEGKVVEAKAPQTLHDFDPQKKPKRNMYAFACAMLASMTSILLGYDIGVMSGAAIYIQRDLKVSDVQIEILLGIINIYSLIGSCLAGRTSDWIGRRYTIVFAGVIFFAGALLMGFSPNYSFLMFGRFVAGVGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILVGYISNYAFSKLSLHLGWRMMLGVGAVPSVILTVGVLAMPESPRWLVMRGRLGDAIKVLNKTSDSKEEAQLRLAEIKRAAGIPEDCNDDVVQVTNKNTGDGVWKELFLYPTPAVRHIVIAALGIHFFQQASGVDAVVLYSPKIFQKAGIKDDTHQLLATIAVGFVKTIFILVATFMLDRVGRRPLLLTSVGGMVLSLLTLAVSLTIIDHSETKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLSKAITIGGAFFLFGAIAAAGWVFFYTMLPETQGKTLEEMEGSFGKFGRKSQSYDSTHNELDNGKDQVAQVQLGTNVSS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03757 526 PRINTS Sugar transporter signature 41 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03757 526 PRINTS Sugar transporter signature 124 143 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03757 526 PRINTS Sugar transporter signature 298 308 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03757 526 PRINTS Sugar transporter signature 392 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03757 526 PRINTS Sugar transporter signature 415 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03757 526 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 16 509 IPR045262 GO:0015144
Car06g03757 526 MobiDBLite consensus disorder prediction 510 526 - -
Car06g03757 526 CDD MFS_PLT 36 487 IPR044776 GO:0005351
Car06g03757 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 480 IPR020846 GO:0022857
Car06g03757 526 Gene3D MFS general substrate transporter like domains 23 493 IPR036259 -
Car06g03757 526 TIGRFAM SP: MFS transporter, sugar porter (SP) family 21 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03757 526 ProSitePatterns Sugar transport proteins signature 1. 87 104 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g03757 526 SUPERFAMILY MFS general substrate transporter 19 488 IPR036259 -
Car06g03757 526 Pfam Sugar (and other) transporter 34 489 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car06g03757 526 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g03757 526 Coils Coil 229 249 - -
Car06g03757 526 PANTHER SUGAR TRANSPORTER 16 509 - -
Car06g03757 526 MobiDBLite consensus disorder prediction 495 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03757 Car-Chr6 69173539 69175960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03757 20 523 Organic Solute Cotransporters AT3G18830 73.373 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03757 - - gmx:100800461 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03757 06 69173539 69175960 Car06g03757 06 69173539 69175960 ECH
Car06g03757 06 69173539 69175960 Car08g00578 08 4928747 4932418 ECH