Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00571 ATGGGAAAAGGAAGAGGCTGTGTTCCCAGCAAGAAAAGAGTACCGGCTGTAACCGAAGAATCTCCGCCGATAACCACCACAGAATCCGACGACTCAATCCAAGAACCACCGTCAGTTCTAACCGATGTCAAACTGAAGGTCTTCATCGTGTTCTATTCAATGTACGGTCACGTAGAAGGGTTGGCGAAGAGGTTGAAGCAAGGCGTCGACGCTGTCGATGGTGTTGAAGGGGTTTTGTACAGAGTGCCTGAGACATTGTCGATTGAGGTCTTGAATCAGGTTAAAGCATCGCCTAAGGATGAAACTATTCCGGTGATTACGCCGGAGGAGCTTCCCGCTGCCGATGGTGTTTTGTTTGGGTTTCCAACTAGGTATGGCTCCATGGCTGCGCAAATGAAGGCTTTCTTTGATTCTACTGGAAGTTTGTGGCAGGGGCAGAAACTTGCCGGAAAACCCGCCGGTGTCTTTGTGAGTACTGGAACTCAAGGCGGCGGTCAAGAAACCACTGCTTGGACGGCAATTACTCAGCTTGCACACCAAGGAATGTTGTTTGTTCCTATTGGATATACATTTGGACCTGGAATGTTCAATATGGAATCCATTAGAGGTGGTTCTCCATATGGTGCAGGAACGTTTGCGGGTGATGGCACAAGAGAGCCAAGTGAAACAGAGCTGGCACTTGCTGAGCATCAGGGCAAGTATATGGCTGCCGTAGTCAAGCGACTCGCCAAGTCCTGA 738 0.4959 MGKGRGCVPSKKRVPAVTEESPPITTTESDDSIQEPPSVLTDVKLKVFIVFYSMYGHVEGLAKRLKQGVDAVDGVEGVLYRVPETLSIEVLNQVKASPKDETIPVITPEELPAADGVLFGFPTRYGSMAAQMKAFFDSTGSLWQGQKLAGKPAGVFVSTGTQGGGQETTAWTAITQLAHQGMLFVPIGYTFGPGMFNMESIRGGSPYGAGTFAGDGTREPSETELALAEHQGKYMAAVVKRLAKS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00571 245 Pfam NADPH-dependent FMN reductase 61 186 IPR005025 GO:0016491
Car08g00571 245 MobiDBLite consensus disorder prediction 20 35 - -
Car08g00571 245 MobiDBLite consensus disorder prediction 1 35 - -
Car08g00571 245 Gene3D - 43 243 IPR029039 -
Car08g00571 245 ProSiteProfiles Flavodoxin-like domain profile. 47 235 IPR008254 GO:0010181
Car08g00571 245 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 46 242 IPR010089 GO:0003955|GO:0010181
Car08g00571 245 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 24 244 - -
Car08g00571 245 SUPERFAMILY Flavoproteins 46 242 IPR029039 -
Car08g00571 245 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 24 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00571 Car-Chr8 4851614 4855376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00571 K03809 - atr:18421453 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00571 08 4851614 4855376 Car08g00571 08 4851614 4855376 ECH
Car06g03756 06 69149007 69154974 Car08g00571 08 4851614 4855376 ECH