Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03756 ATGATTGGACGCAGAGAAAGAGAAGGACCCTTGATGAGGAACAACGCCCAATCTCTACGCAAATCAAGGGTTTTAACCGCTGTAGCAATTGGTATTCTAATTGGATGCATCTTAGCTTTTTTGTTTCCCAATGGTTTCATTGTTTCTCACTCTCGTCACCTCCCTGTTAAGGGATCCAAGACCCAGGAAATCTCAGCTGAATGTGAATCCTCGGATAGAGTCAACATGTTAAAATCAGAGTTTGTAGCAGTATCAGATAATAATGCTGAACTTAAAAAACAGGTCAGGGAGTTGACCGAAAGGCTTAGGCTTGCCGAGCAAGGGAAAGACCAGGCTCAAAAACAGTTTCTTGCATTGGGTAAACAGGTTAAAGCTGGACCTTTTGGTACCGTCAAGGGATTCAGAACCAATCCTACTGTTGTTCCTGATGAATCTGTGAACCCGAGATTGGCAAAGATATTAGAGAAAATTGCAATTAATCGAGAGATCATAGTTGCACTTGCAAACTCCAATGTGAAGGAGATGCTTGAGGTCTGGTTCACCAATATCAAGAGAGTTGGTATTCCGAATTATATAGTTGTTGCTTTAGACGACGAGATTTCCAAATATTGTGAATTAAATCAAGTTCCATTTTACAAAAGAGACCCAGATGAAGGTATTGATACTATTGGGAAAAGTGGAGGGAACCATGCTGTCTCTGGGCTTAAATTTCTTATCTTAAGAGAATTTTTGCAGTTGGGATATAGTGTTCTTCTATCCGATGTCGACATTGTCTATTTGCAGAATCCTTTCAATCATCTATACCGGGATTCAGATGTAGAGTCCATGAGCGACGGTCATGATAACATGACAACTTACGGCTTCAACGATGTCTTTGACGAACCGGCAATGGGTTGGTCTCGATACGCCCATACCATGAGGATATGGGTTTACAATTCTGGTTTCTTTTATATCAGACCAACCATTCCTTCAATTGAGCTTTTGGATCGTGTGGCGACACGACTTTCCAAGGAGAATGCATGGGACCAAGCCGTTTTCAATGAAGAACTCTTTTACCCCTCACATCCTGGCTATGAAGGGCTTCATGCTGCCAGAAGAACAATGGATATATACCTCTTTATGAACAGCAAGGTTCTTTTTAAAACAGTAAGATATGATGCTAACCTCAGTAAATTGAAACCGGTAATTATTCACGTGAACTACCACCCCGATAAGCTTCCACGAATGAAAGCGATTGTTGAATATTATGTTAATGGGAAGCAGGAAGCTCTCAAACCTTTCCCTAATGGCTCAAGAGGTGGTTGCATACCAAGCAAGAAAAAATCACCAATTACCGATCAAGAAGAGAATGAACAACAACAACAACAGCCTCTTAGTGTTGAAATTGAAACCCAAATTCCAAAAAAAGATGATACAACAGCAACAAGTAGAAGCATAGATGTAGTAGTATTACCAACATCAACATCAGAAGCAGTGAAAAAACTGAAACTTTACATTGTTTTCTACTCAATGTATGGCCATGTTGAATCATTAGCAAGATCATTGAAGAAAGGTGTTGATTCTGTTGATGGTGTTGAAGGTGTTTTGTACCGTGTTTTAGAGACACTTCCTAAGGAAGTGTTGGAACTGATGAAGGCACCTGAAAAGGGTGATGATGATGAGGTTCCAATTATATCTGCTGAGAATTTGGTTGAGGCTGATGGTTTGTTGTTCGGGTTTCCGACGAGGTATGGTAGCATGGCAGGGCAGATGAAGGCGTTTTTCGATTCGACAGGTCAGTTGTGGAGGGAGCAGAAGCTTGCTGGTGTTCCTGCTGGTTTTTTTGTTAGTACTGGAACTCAGGGTGGTGGCCAAGAAACCACAGCTTGGACAGCAATAACACAATTAGTCCACCATGGAATGCTCTATGTTCCTATTGGTTACACTTTTGGTGCTGGAATGTTTGAAATGGATTCAATTAGAGGTGGATCTCCATATGGTGCTGGAACCTTTGCTGGAGATGGATCAAGACAACCAAGTGAAGCTGAGCTTGCACTAGCAGAGTATCAAGGTAGATACATGGCTTCAATTGTCAAGAAGTTAGGCCACAAAAGCTAG 2097 0.4139 MIGRREREGPLMRNNAQSLRKSRVLTAVAIGILIGCILAFLFPNGFIVSHSRHLPVKGSKTQEISAECESSDRVNMLKSEFVAVSDNNAELKKQVRELTERLRLAEQGKDQAQKQFLALGKQVKAGPFGTVKGFRTNPTVVPDESVNPRLAKILEKIAINREIIVALANSNVKEMLEVWFTNIKRVGIPNYIVVALDDEISKYCELNQVPFYKRDPDEGIDTIGKSGGNHAVSGLKFLILREFLQLGYSVLLSDVDIVYLQNPFNHLYRDSDVESMSDGHDNMTTYGFNDVFDEPAMGWSRYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKENAWDQAVFNEELFYPSHPGYEGLHAARRTMDIYLFMNSKVLFKTVRYDANLSKLKPVIIHVNYHPDKLPRMKAIVEYYVNGKQEALKPFPNGSRGGCIPSKKKSPITDQEENEQQQQQPLSVEIETQIPKKDDTTATSRSIDVVVLPTSTSEAVKKLKLYIVFYSMYGHVESLARSLKKGVDSVDGVEGVLYRVLETLPKEVLELMKAPEKGDDDEVPIISAENLVEADGLLFGFPTRYGSMAGQMKAFFDSTGQLWREQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYTFGAGMFEMDSIRGGSPYGAGTFAGDGSRQPSEAELALAEYQGRYMASIVKKLGHKS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03756 698 Gene3D - 493 695 IPR029039 -
Car06g03756 698 SUPERFAMILY Flavoproteins 496 694 IPR029039 -
Car06g03756 698 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 496 694 IPR010089 GO:0003955|GO:0010181
Car06g03756 698 Pfam NADPH-dependent FMN reductase 511 639 IPR005025 GO:0016491
Car06g03756 698 Coils Coil 81 115 - -
Car06g03756 698 Pfam Nucleotide-diphospho-sugar transferase 188 406 IPR005069 -
Car06g03756 698 ProSiteProfiles Flavodoxin-like domain profile. 497 687 IPR008254 GO:0010181
Car06g03756 698 MobiDBLite consensus disorder prediction 427 458 - -
Car06g03756 698 PANTHER ARABINOSYLTRANSFERASE RRA3 13 484 IPR044290 GO:0016757|GO:0080147
Car06g03756 698 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 13 484 - -
Car06g03756 698 SUPERFAMILY Nucleotide-diphospho-sugar transferases 164 360 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03756 Car-Chr6 69149007 69154974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03756 K20783 - gmx:100804189 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03756 06 69149007 69154974 Car06g03756 06 69149007 69154974 ECH
Car06g03756 06 69149007 69154974 Car08g00571 08 4851614 4855376 ECH