Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00478 ATGAACTCGGTTACTCTTCCTTTCCCTTCACTCCCCTCCGCCACTCATACCCTACTCTCTAATCCACGCGCCACCGTTGGTTTCAGCTGCTTCCTCACCTCCGCTCATCTTCCAAGGCTTCGTGGCTCGCACCTTTTCGCTGCAAACTCCCTCACTGCTAATTCTGTGCCTCCAAAAAATGGAGTGTATACTGTGGGTGACTTTATGACAAAGCAAGATGAATTACAAGTAGTGAAGCCCACAACAACTGTGGATGAAGCTTTGGAAGCTCTTGTTGAGCACAGAATAACTGGTTTTCCTGTGATTGATGATAACTGGAAGCTAGTTGGTGTTGTTTCAGATTACGACTTGTTAGCACTGGACTCTATTTCAGGTCATGGGCGAACAGATAACAGCATGTTTCCAGAAGTTGATAGTACTTGGAAAACTTTCAATGAGGTTCAGAGACTTCTGAGTAAGACCAACGGGAAGGTGATTGGTGAATTAATGACCACTGCCCCTATGGTCGTTCGGGAGACCACCAATCTTGAGGACGCTGCTAGATTGTTGCTGGAAACAAAATTTCGACGCCTTCCAGTTGTAGATGCCGAGGGTAGATTGGTTGGGATTATAACAAGAGGAAATGTTGTAAGAGCTGCACTTCATATGAAACGAGAGAGCCAAAAGAAAGCATGA 675 0.4563 MNSVTLPFPSLPSATHTLLSNPRATVGFSCFLTSAHLPRLRGSHLFAANSLTANSVPPKNGVYTVGDFMTKQDELQVVKPTTTVDEALEALVEHRITGFPVIDDNWKLVGVVSDYDLLALDSISGHGRTDNSMFPEVDSTWKTFNEVQRLLSKTNGKVIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHMKRESQKKA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00478 224 Gene3D - 60 220 IPR046342 -
Car08g00478 224 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE ISOFORM X1 42 221 - -
Car08g00478 224 Pfam CBS domain 159 214 IPR000644 -
Car08g00478 224 Pfam CBS domain 65 119 IPR000644 -
Car08g00478 224 ProSiteProfiles CBS domain profile. 69 129 IPR000644 -
Car08g00478 224 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 42 221 - -
Car08g00478 224 ProSiteProfiles CBS domain profile. 163 220 IPR000644 -
Car08g00478 224 SMART cbs_1 166 214 IPR000644 -
Car08g00478 224 SMART cbs_1 74 122 IPR000644 -
Car08g00478 224 CDD CBS_pair_plant_CBSX 71 212 - -
Car08g00478 224 SUPERFAMILY CBS-domain pair 62 212 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00478 Car-Chr8 3997711 4003285 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00478 - - gmx:100527375 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00478 08 3997711 4003285 Car08g00478 08 3997711 4003285 ECH
Car06g01753 06 17366154 17370311 Car08g00478 08 3997711 4003285 ECH