Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01753 aTGAATTCGATTCATTTGATTAACACTCTTGCACTCGGTACTCCGCTTCGGTCTTTGGCTCCCTCCTTTATACCTCAATGCCAATCTCTGCCTCCTTCTTCCGCCATCCCAAAACGGCAGCGTTTTTCACACTCCGCTGGTTTCCGTCTCGCCTCAGGCCAAACCATCAATTCGGTCCCACGCGCGAATGGAACTTATACGGTTTCCGATTTCATGACGAAGAAGCATAATTTGCATGTTGTCAAAACCACCACATCCGTTGATGAAGCTCTGGAGGCTCTCGTCATCAACAGAATTAGTGGTCTTCCAGTAATCGATGACGACTGGaatttgGTTGGAGTTGTTTCAGATTATGACTTGTTAGCAATCGATACAATATCAGGTGCTGCTCAAAGTGACGCAGGCTTATTCCCTGATGTCGACAGTTCTTGGAAAACATTCAATGAGATACAAAAGCTGCTTAGTAAGACCAATGGCAAAGTTGTCGGGGACTTAATGACTCCAAGTCCACTTGTTGTTCATGAATCCACTAGCCTTGAGGATGCTGCCAGGCTGTTGCTTGAAACAAAATATCGCCGACTACCTGTTGTTGACAAAGATGGAAAGCTGGTTGGACTTATTACAAGGGGAAATATTGTTAAGGCAGCTCTGCTGTCAAAGCGTGTTGGGGAGAGGCCAACATAG 684 0.4561 MNSIHLINTLALGTPLRSLAPSFIPQCQSLPPSSAIPKRQRFSHSAGFRLASGQTINSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVINRISGLPVIDDDWNLVGVVSDYDLLAIDTISGAAQSDAGLFPDVDSSWKTFNEIQKLLSKTNGKVVGDLMTPSPLVVHESTSLEDAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALLSKRVGERPT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01753 227 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 52 222 - -
Car06g01753 227 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 52 222 - -
Car06g01753 227 CDD CBS_pair_plant_CBSX 74 215 - -
Car06g01753 227 SUPERFAMILY CBS-domain pair 61 216 IPR046342 -
Car06g01753 227 SMART cbs_1 169 217 IPR000644 -
Car06g01753 227 SMART cbs_1 77 125 IPR000644 -
Car06g01753 227 Pfam CBS domain 68 122 IPR000644 -
Car06g01753 227 Pfam CBS domain 162 215 IPR000644 -
Car06g01753 227 ProSiteProfiles CBS domain profile. 72 132 IPR000644 -
Car06g01753 227 ProSiteProfiles CBS domain profile. 166 222 IPR000644 -
Car06g01753 227 Gene3D - 63 222 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01753 Car-Chr6 17366154 17370311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01753 - - gmx:100814621 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01753 06 17366154 17370311 Car06g01753 06 17366154 17370311 ECH
Car06g01753 06 17366154 17370311 Car08g00478 08 3997711 4003285 ECH