Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00469 ATGGAGGTTGCAGGAGGAGGAGCCGGCGGCGCCGATGACATTTCCCAAACGGAAACGGCGATATTGCGATGGAAATTGGCGGTGTGGCAACAGTATCAGCACGTGTTAGACAAAATAACCCCACACGTGCTACGGCGTTGGTTAGGGTTCTTGGTTGTGGCCTTCATTTACGTCCTCCGTGTCTACTTCTTGCAAGGCTTCTACGTCGTTTCCTATGGTCTTGGAATTTATATCCTTAACCTTCTCATCGGTTTCCTCTCCCCTCAGGTCGATCCCGCAATCTCCGACGGCGGCACTCTCCCCACCTCTACTTCCGATGAGTTTCGTCCTTTCGTTCGCCGTCTCCCTGAATTCAAGTTTTGGTGCTCGATAACGAAGGCATTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCATTTGACGTTCCAGTCTTCTGGCCAATACTACTCTTCTACTGGGTGGTCCTGTTCTCACTTACTATGAGGAGACAAATATCACACATGATCAAATATAGATATGTACCATTCACATTAGGGAAACAGAACTATCAGTGA 555 0.4775 MEVAGGGAGGADDISQTETAILRWKLAVWQQYQHVLDKITPHVLRRWLGFLVVAFIYVLRVYFLQGFYVVSYGLGIYILNLLIGFLSPQVDPAISDGGTLPTSTSDEFRPFVRRLPEFKFWCSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYRYVPFTLGKQNYQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00469 184 PANTHER PROTEIN RER1 5 184 IPR004932 GO:0016021
Car08g00469 184 PIRSF AtER_Rer1p 10 184 IPR004932 GO:0016021
Car08g00469 184 Pfam Rer1 family 26 184 IPR004932 GO:0016021
Car08g00469 184 PANTHER PROTEIN RER1C 5 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00469 Car-Chr8 3934617 3937012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00469 1 183 Miscellaneous Gene Families AT4G39220 65.054 1.08e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00469 - - gmx:100805147 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00469 08 3934617 3937012 Car08g00469 08 3934617 3937012 ECH
Car08g00469 08 3934617 3937012 Car07g01416 07 13348615 13351621 PCT