Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01416 ATGAACACGGAAGATGCATCTCCGGCAGCCACCATAACACGGTGGAAGTTCGAGTTATCACGCCGGTACCAACACATTCTCGACAAATCAACGCCGCACATTGGTCAACGATGGTTAGGCTCTCTCATGGTTGCTTTGATTTACGTGCTTCGCGTTTACATGGTTCAAGGCTTCTACGTCGTTTCCTACGGTCTCGGCATTTACATCCTCAATCTCTTGATCGGATTCCTTTCGCCTCAGGTTGATCCAGAGATTCTTGATGCTGATCATGGCCCTTCCTTACCTACCTCCGGTTCGGATGAGTTTCGTCCCTTCGTTCGTCGTCTCCCTGAGTTCAAGTTCTGGTACTCAATCACGAAGGCATTTTGTATTGCATTTGTGATGACTTTCTTTAGTGCGTTTGATGTCCCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACACTTACTATGAGGAGACAGATATCTCACATGATCAAGTATAAATATGTACCATTCTCGTTTGGAAAGCAGCGCTATGATCGGAAGAGAACATCGGCAGAAAGCAAAAGCCTTTCAGATGACTGA 579 0.4646 MNTEDASPAATITRWKFELSRRYQHILDKSTPHIGQRWLGSLMVALIYVLRVYMVQGFYVVSYGLGIYILNLLIGFLSPQVDPEILDADHGPSLPTSGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDRKRTSAESKSLSDD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01416 192 PANTHER PROTEIN RER1C 4 188 - -
Car07g01416 192 Pfam Rer1 family 16 177 IPR004932 GO:0016021
Car07g01416 192 PANTHER PROTEIN RER1 4 188 IPR004932 GO:0016021
Car07g01416 192 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01416 Car-Chr7 13348615 13351621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01416 2 185 Miscellaneous Gene Families AT4G39220 68.478 9.36e-95 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01416 - - ahf:112799570 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01416 07 13348615 13351621 Car07g01416 07 13348615 13351621 ECH
Car08g00469 08 3934617 3937012 Car07g01416 07 13348615 13351621 PCT