Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00336 ATGACTGCAACTCCTCTCATCACTATTAGTCCCGACGAGCTCAGGTTCCATTTTGAGCTGGAAAAGCAAACATTTTGTGACCTTAAAGTCCTGAATAACACAGAGAACCATGTTGCTTTCAAGGTCAAAACCACTTCACCTAAGAAATACTTTGTACGACCAAACACTGGTGTTATACAGCCCTGGGACTCATGTATCATCAGAGTTACCCTCCAAGCTCAACGTGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACTATAGTGAATCCAAATACTGATGTTGATGATCTTCCACCAGATACTTTTAATAAGGATAGTGGTAATTCAATAGAGGATTTGAAACTACGAGTCTCATATATCACTCCCACCTCACCCGAAGGAAGCTCTGAAGATGATGCAGCAAAGAATTCCTCACAAAAACTCAATTCCTCTTCCGCTGTACAGCTCCTGAAGGAAGAAAGAGAAGCCGCTGTCAGACAAACACGACAGCTTCAACAAGAACTGGACTTGCTGAAAAGGCATAGAAGCCGGAGAGGCGATCCTGGCTTTTCGTTCACCTTCGCCATTTTTGTTGGTCTACTTGGAACTTTGCTTGGCTTTCTAGTGAAATTTTTATTCTCCTCGCCATCTACAGAATAA 657 0.4231 MTATPLITISPDELRFHFELEKQTFCDLKVLNNTENHVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVNPNTDVDDLPPDTFNKDSGNSIEDLKLRVSYITPTSPEGSSEDDAAKNSSQKLNSSSAVQLLKEEREAAVRQTRQLQQELDLLKRHRSRRGDPGFSFTFAIFVGLLGTLLGFLVKFLFSSPSTE 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00336 218 Coils Coil 153 180 - -
Car08g00336 218 MobiDBLite consensus disorder prediction 127 152 - -
Car08g00336 218 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 215 IPR016763 GO:0005789
Car08g00336 218 Pfam MSP (Major sperm protein) domain 7 103 IPR000535 -
Car08g00336 218 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Car08g00336 218 SUPERFAMILY PapD-like 4 136 IPR008962 -
Car08g00336 218 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 215 - -
Car08g00336 218 Gene3D Immunoglobulins 2 130 IPR013783 -
Car08g00336 218 PIRSF VAMP_assoc_prot 1 159 IPR016763 GO:0005789
Car08g00336 218 PIRSF VAMP_assoc_prot 133 210 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00336 Car-Chr8 2640852 2644973 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00336 - - gmx:100794270 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01239 07 11226333 11231830 Car08g00336 08 2640852 2644973 PCT