Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00297 ATGACGAGTATGTCCACTGGTGACCTTCTCAACATCGAACCTGTCGAACTCAAGTTCTCCTTTGAGTTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCAAATAAGACCGATAGCTATGTAGCTTTCAAGGTAAAAACAACCAATCCCAAGAAGTATTGTGTTCGTCCAAATACTGGAGTTGTTTTGCCTCGATCTACATGTGATGTTATAGTTACCATGCAAGCGCAAAAGGAATATCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAAAGTGTAAGAGTAACTGATGGAGCTAACCCAAAGGAGATTACTCCTGAAATGTTCAACAAGGAAGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGGTGTATGTTGCTCCACCTCAACCTCCATCCCCGGTCCAAGAAGGTTCAGAGGAAGGGTCATCACCTAGAGGTTCTGTTACCGAAAATGGAAATGGCAATGGTTCTGACTCCACAACAGTGATGAGATCATTTGCCGAACGACATGAGTCTCCAGAAAAATCTGCAGAGGCAAAAGCTCTTATGTTAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAAATAACAAGCTTCGTCAGGAACTGGATCTGCTGAGACGGGAAAGCAACAAAAGTCGTGGGGGTACCTCGATGGTCTTTGTCATAATAATTGGTTTACTTGGCATAATTATGGGGTATCTCTTGAAGAAGAACTAA 735 0.4231 MTSMSTGDLLNIEPVELKFSFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQAQKEYPPDMQCKDKFLLQSVRVTDGANPKEITPEMFNKEAGHVVEECKLRVVYVAPPQPPSPVQEGSEEGSSPRGSVTENGNGNGSDSTTVMRSFAERHESPEKSAEAKALMLRLTEEKNNAIQQNNKLRQELDLLRRESNKSRGGTSMVFVIIIGLLGIIMGYLLKKN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00297 244 Gene3D Immunoglobulins 3 133 IPR013783 -
Car08g00297 244 Coils Coil 180 214 - -
Car08g00297 244 ProSiteProfiles Major sperm protein (MSP) domain profile. 9 129 IPR000535 -
Car08g00297 244 SUPERFAMILY PapD-like 4 144 IPR008962 -
Car08g00297 244 MobiDBLite consensus disorder prediction 130 165 - -
Car08g00297 244 Pfam MSP (Major sperm protein) domain 10 114 IPR000535 -
Car08g00297 244 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 4 242 - -
Car08g00297 244 MobiDBLite consensus disorder prediction 139 165 - -
Car08g00297 244 PIRSF VAMP_assoc_prot 2 243 IPR016763 GO:0005789
Car08g00297 244 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 4 242 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00297 Car-Chr8 2338287 2342084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00297 - - gmx:100798247 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00297 08 2338287 2342084 Car08g00297 08 2338287 2342084 ECH
Car08g00297 08 2338287 2342084 Car07g01239 07 11226333 11231830 PCT