Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00296 ATGGCAAAAAGCTACTTCAAACAAGAGCATGATCTTGAAAAGAGAAGAGCTGAGGCTGCTAGGATTAGGGAGAAATACCCAGACAGAATCCCAGTAATTGTGGAGAAGGCTGAAAGGAGTGACATCCCAAGCATTGACAAGAAAAAGTACCTTGTCCCTGCTGACCTAACTGTTGGACAGTTTGTCTATGTTATCCGCAAAAGGATTAAATTAAGTGCAGAAAAGGCTATCTTTATATTTGTGGACAATGTCCTTCCTCCTACAGGTGAACTTGAGCAAATTATATACTCCATTTTTTCAATACATGGCATGATTCTCTAG 321 0.3988 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELEQIIYSIFSIHGMIL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00296 106 Pfam Autophagy protein Atg8 ubiquitin like 14 97 IPR004241 -
Car08g00296 106 PANTHER AUTOPHAGY-RELATED PROTEIN 1 96 - -
Car08g00296 106 SUPERFAMILY Ubiquitin-like 3 101 IPR029071 -
Car08g00296 106 Gene3D - 1 100 - -
Car08g00296 106 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 96 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00296 Car-Chr8 2332882 2336109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00296 K08341 - jre:109013115 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00296 08 2332882 2336109 Car08g00296 08 2332882 2336109 ECH
Car08g00296 08 2332882 2336109 Car07g01234 07 11196093 11198924 PCT