Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01234 ATGGCAAAGAGTTACTTCAAACAAGAGCATGATCTTGAGAAAAGAAGAGCTGAGGCTGCTAGGATTAGGGAGAAATACCCAGACCGTATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATTCCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGATCTCACAGTTGGACAGTTTGTCTACGTTATCCGTAAAAGAATTAAACTAAGTGCAGAAAAGGCAATCTTTATTTTTGTGGACAATGTTCTTCCACCTACAGGAGCAATAATGTCTGCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGGGAGAACACCTTTGGGGACCTGATTTCCTAG 366 0.4126 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLIS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01234 121 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Car07g01234 121 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Car07g01234 121 Gene3D - 1 117 - -
Car07g01234 121 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Car07g01234 121 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Car07g01234 121 CDD Ubl_ATG8 12 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01234 Car-Chr7 11196093 11198924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01234 K08341 - gmx:100781703 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01234 07 11196093 11198924 Car07g01234 07 11196093 11198924 ECH
Car08g00296 08 2332882 2336109 Car07g01234 07 11196093 11198924 PCT