Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00239 atGGGTATTAGCCTTTCTTTCTTTCGACCAAACCCAACAACCGCTTCTTCCGGTTCCACCTTAGATGATTTACCGGAAAGTTGCGTCGCTTCCATTATCTCTTACATGGATCCTCCTCAGATCTGTCAACTCGCTACCTTGAATCACGCTTTTCGCGCTGCTTCTTCTGCTGATTTCGTTTGGGAATCCAAATTGCCACCCAATTACGATTCTATCCTCACCAAAATCTTTAACCACGATTTTCCTCTCCATTCCGGAAAACGATCGATTTACGCCTCTCTTTGTCGCCTCAATACTTTTGAAGGAGGCACCAAGAAAGTTTGGCTTGATAAAGGCACAGGTAAGCTTTGCTTGGCAATATCAGCCAAGGGACTATCCATAACTGGGATTGATGATAGGAGATATTGGAATCATATCCTCACTGAAGAATCTAGATTCAGTAGTGTTGCATACCTTCAGCAAACCTGGTGGTTTGAAGTGGACGGGGAAGTAGAGTTCCCATTTCCAGCCGGGACTTATAGCTTATATTTCAGAGTACACCTAGGGCGAGCCGCCAAGAGATTTGGACGTCGGGTCTGCAACACTGAACATGTTCATGGGTGGGACAAAAAGCCTGTCCGATTCCAACTCTGGACTTCAGATGGGCAATACGTTGCCTCCCAGTGTTTTCTGAAAGAATCTGGCAATTGGAGTTTTTACCATGCAGGGGACTTCACGGTTGAGGATGGCAATTCATCAACCAAAGTTAAATTCTCTATGACTCAAATTGATTGCACACACACTAAAGGTGGTCTGTGTTTGGATTCTGCATTTATTTACCCGAGTGAATTCAAAAAGACCAAGTCATTTTTGAATTGCTCCTAA 864 0.441 MGISLSFFRPNPTTASSGSTLDDLPESCVASIISYMDPPQICQLATLNHAFRAASSADFVWESKLPPNYDSILTKIFNHDFPLHSGKRSIYASLCRLNTFEGGTKKVWLDKGTGKLCLAISAKGLSITGIDDRRYWNHILTEESRFSSVAYLQQTWWFEVDGEVEFPFPAGTYSLYFRVHLGRAAKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKESGNWSFYHAGDFTVEDGNSSTKVKFSMTQIDCTHTKGGLCLDSAFIYPSEFKKTKSFLNCS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00239 287 PANTHER F-BOX PROTEIN PP2-A15 1 282 - -
Car08g00239 287 SUPERFAMILY F-box domain 6 94 IPR036047 GO:0005515
Car08g00239 287 Pfam Phloem protein 2 116 274 IPR025886 -
Car08g00239 287 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Car08g00239 287 PANTHER F-BOX PROTEIN PP2-A12 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00239 Car-Chr8 1903767 1906938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00239 - - gmx:100777716 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00239 08 1903767 1906938 Car08g00239 08 1903767 1906938 ECH
Car08g00239 08 1903767 1906938 Car07g02687 07 51688658 51690877 ECH