Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02687 ATGGGTGCTAATTTTTCTTCATGTGTATGTGATGGTGATTCTACTTCAATGAGACCAAGACTTGGTGATATACCTGAGAGTTGTGTAGCATTGGTTTTGATGTATTTGGATCCACCAGATATATGTATGTTAGCACGATTGAATAGAGCATTTCGTGATGCTTCTTTTGCTGATTTTGTTTGGGAATCGAAGTTGCCTTTGAATTATAAGTTCATCGTGGGTAAAGCTATGGAGGATGATGATGATGCTTCTGTTGCTGAATTGGGGAAGAGGGATATTTATGCAAGACTTTGCAATCATAATTTGTTTGATAATGGAACTAAGGAAATTTGGCTAGATAAGAGGACTGGTGGAGTTTGCTTGGCAATTTCTTCGAAAGCGTTAAGGATTACGGGGATAGATGATCGCAGATATTGGAATCACATTTCGACCGAAGAGTCAAGGTTCCATACAGTTGCTTATCTTCAACAAATATGGTGGCTTGAAGTGGAAGGAGATATTGATTTCCAATTTCCACAAGGGACATACAGTGTGTTCTTCAAACTTCACCTTGGCAGGTCATCCAAAAAGCTCGGTCGTCGAGTTTGCAAGACGGAGCACATCCATGGCTGGGCTGCAAAACCTGTAAAGTTTCAGCTGATGACTTCTGACGGTCAACGTGTCATATCCCATGCTCATTTGGATAATCCAGGACAATGGATCCTCTACCATGTAGGAGACTTTGTTTCAAATAATTCGGACGATTTGATGAAGATCAAGTTTTCATTGACTCAAATAGATTGCACTCATACAAAAGGTGGTTTGTGTGTAGACTCTGTGCTTATATGCAATAGTGGTGAGGTAAGAAAAGAAATATAA 858 0.3974 MGANFSSCVCDGDSTSMRPRLGDIPESCVALVLMYLDPPDICMLARLNRAFRDASFADFVWESKLPLNYKFIVGKAMEDDDDASVAELGKRDIYARLCNHNLFDNGTKEIWLDKRTGGVCLAISSKALRITGIDDRRYWNHISTEESRFHTVAYLQQIWWLEVEGDIDFQFPQGTYSVFFKLHLGRSSKKLGRRVCKTEHIHGWAAKPVKFQLMTSDGQRVISHAHLDNPGQWILYHVGDFVSNNSDDLMKIKFSLTQIDCTHTKGGLCVDSVLICNSGEVRKEI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02687 285 Pfam Phloem protein 2 119 275 IPR025886 -
Car07g02687 285 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Car07g02687 285 SUPERFAMILY F-box domain 17 73 IPR036047 GO:0005515
Car07g02687 285 PANTHER F-BOX PROTEIN PP2-A13 1 283 - -
Car07g02687 285 PANTHER F-BOX PROTEIN PP2-A15 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02687 Car-Chr7 51688658 51690877 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02687 - - gmx:100814033 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02687 07 51688658 51690877 Car07g02687 07 51688658 51690877 ECH
Car08g00239 08 1903767 1906938 Car07g02687 07 51688658 51690877 ECH
Car07g01168 07 10494769 10497231 Car07g02687 07 51688658 51690877 ECH