Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00229 ATGTTTCGTTCTGCAAAATGGAGGAGTGAGAAAAACAGAATTAAAATTGTTTTCAAGCTTCACTTCAATGCCACTCAGGTGTTACAATCAGGGGTAGATGCATTGGTGTTGTCAATAGTTCCTGGAGATATTGGAAGACCAACTAAGAGATTAGAGAAAGCTACGGTTCAAGATGGAAATTGTAGGTGGGAAAATCCGGTATACGAAACAGTCAAGTTTATTCAGGATCCTAAGACTGGGAAAATCAGTGACAAAATATATAATTTTTTGCTTTCCACGGGGTTATCGAAAGCTAGCTATATTGGAGAGGTTTCTATAAACTTTTCTGATTATGTAGATGCCACAAAGCCTTCTCATGTATCTCTTCCCATCAGAACTTCTCATTGTGATGCTGTTTTACATATATCTATCCAGAAGCTGCAAGAAAATAGTGATCAAAGAGAGGAAGAAGAATGTGAAGTTGCCAAACTAAAATTGGATGATAGGAGCTTAAGGAACCAATTAAGCAATGGAGATACAGATGAAAGCACTAAAAGTTATTTTTCTGAAGATGTATCTACCAAAGCAATTATCAATAGGACGTCTAGCGGATCCGACATTACACTATCGAGTTCCGATGACAGCTCCGGAGTTGAGACTCCGCGCGAAATTGGACTGAGAAAAACAAACATAAAACTCACCACCAACCAGTTTATTCCAGCTATGCATCATGCTGCAGAGCCTGCTGTCAATGACTCAACATCAGTGCATGATTTACATCCGAGATCACAATGGGAATTGTCATCTAGCTCAGAGATTGGGTTAAGTACGGGTGATTCGAAAAATCCTTCTCATAATGCACTTTCGATGGAAAGATCCCAACAAGAAGCGTCCCATTTGGAGATTGAGAGACTGAAGGCTGAACTTGCTGCTCTGGCTAGGCAGATGAATGTCTCAGACATTGAACTACAGACCCTTAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGGCAGGATCTCACCAAGGAAATCATTATCTTGAAAGATGAAAGGGATGCACTCAAGATAGAATGTAACAATATCAGGTTGTTCCACAAGCGCATGGACGATGCCAAAGTTAGAAACAGGTCGCAGTTGGAAAATGGTGATCTCCATGCTTTTGTTGAAGAAATTAGACAAGAATTGAATTATGAGAAAGACACGAATGCAAATCTCCGATTACAGTTAAAAAAGATGCAAGAATCGAATGCTGAATTGGTCCTTGCTGTGCAGGACTTAGAAGAAATGTTGGAGCAGAAAAATAGAGATATGTGTAATGATTCTAATAAACGCGAACTACATAAAATTTCCCAAGAGTTAGGAATGAAGCTCTTAAAATGTGAAACAGAAGATGATGATGAACAGAAAGCATTGGACAAGTTTGTTAAGGAGAACAGCGATGCCAAGGAGACGCATTTGCTTGAGAAAAAAATTATAGACTTGTATGGTGAAATCGAAATGTATAGAAGAGACAAAGAGGAGTTAGAGATGCAGGTGGAGCAGCTTGCATTGGACTATGAGATATTGAAACAGGAAAACCATGGTATTTCTCATAAGCTAGAGCAAAGCCAACTGCAGGAACAGTTAAATATGCAATGTGAGTGTTCATCTCCTCATGCTGCTATGAATGACATTGAAACTCACATTGAGAATCTGGAAAAAGAACTCAAGGAACAGTCACAAGATTTCTCAAATTCTTTAGCTACCATAAAGGAACTAGAAACTCATATCAGAAGATTAGAGGAGGAACTTGAAAAACAAGCACAAGGATTTGAAGCTGATCTAGAAGCAGTGGCATGCGAAAAAGTCGATCAAGAGCAAAGAGCCATCCAAGCTGAGGAAGCTTTGCGAAAGACAAGACTTAAAAATGCTAACACTGCTGAGAGACTTCAAGAGGAATTCCAAAGGCTCTCAATGCAAATGACTTCTACATTTGATGAAAATGAAAAGGCTACTATGAAAGCGTTGACAGAAGCAAGTGAACTGCGCGCGCAGAAAAAACTAGTGGAAGGAATGCTTCATAGAGTTGAAGAAGAGCTTCAATCAACTAAAGTCGATTACGAGGAAAAGTTGAACGATCTTTCCAACCAAATCGATACAATGACAGTTCAGATACGGCAGATGTTGGTGGAAATTGAAGACAAGTCTAAGAAGCTCGAAAATCAGACGAAGCTTGGGGAACAAGTTAATAGTGATTTCTCTGAGAAGATCGATATGCTACAAGCCGATAATGAAAAGCTTAAAGTGGAGATTTTGCACTTAAGTGAACAAGTAGAAGGAAAAGAAATTTTAAGATCTGACTTGGAACTTATGAAGAAATCAGTTGAGGAATCTGAAAGACAGTTACATAGAGGAACTGTGGAAAGAAATGAATTTATGAGTACAATTGCATTATTGAAGAAGGAAATGGAGGATTCGCTTAATGAGCTAAATAAAATGAGAAATCTCAAGGATGAAAAGGAAGAAGAGGCTACAATCTTGAAGTCAGAGTTGGAAGCTATTAGAGCTCAATGCAGTGATTTGAAACAGTCACTTTTTGAGGATGAGGCTGAGAAAGAAAAACTAAGAAAACAAATTTCTCAGTTAAAGAGTGAAATAAAGAAGAAAGGTGATGCATTAACCGGAATTGAGAAGAGGTTCAGGGATAGTAATGGACGCACACAACTTTCTGATGGAACTAAAACCATTCCAATCAACAAAAGAAATTCTTCTAGTCCTCAGAATTCCAAAGAAATGGCAAGTCTGAGAGAGAAAATAAAAATGCTTGAGGGCCTGATAAAGTCAAAGGAAGCTGCATTAGAAACTTCAAAAACTTCATCTATGGAAAAGGAAAAGGAACTCCAAACCAGAATTGTGGAGCTTGAGAACAAAGTGGAGGAATTCAATGAATATGTTAATTTACACAAGGTAAACTCATACTGA 2940 0.3827 MFRSAKWRSEKNRIKIVFKLHFNATQVLQSGVDALVLSIVPGDIGRPTKRLEKATVQDGNCRWENPVYETVKFIQDPKTGKISDKIYNFLLSTGLSKASYIGEVSINFSDYVDATKPSHVSLPIRTSHCDAVLHISIQKLQENSDQREEEECEVAKLKLDDRSLRNQLSNGDTDESTKSYFSEDVSTKAIINRTSSGSDITLSSSDDSSGVETPREIGLRKTNIKLTTNQFIPAMHHAAEPAVNDSTSVHDLHPRSQWELSSSSEIGLSTGDSKNPSHNALSMERSQQEASHLEIERLKAELAALARQMNVSDIELQTLRKQIVKESKRGQDLTKEIIILKDERDALKIECNNIRLFHKRMDDAKVRNRSQLENGDLHAFVEEIRQELNYEKDTNANLRLQLKKMQESNAELVLAVQDLEEMLEQKNRDMCNDSNKRELHKISQELGMKLLKCETEDDDEQKALDKFVKENSDAKETHLLEKKIIDLYGEIEMYRRDKEELEMQVEQLALDYEILKQENHGISHKLEQSQLQEQLNMQCECSSPHAAMNDIETHIENLEKELKEQSQDFSNSLATIKELETHIRRLEEELEKQAQGFEADLEAVACEKVDQEQRAIQAEEALRKTRLKNANTAERLQEEFQRLSMQMTSTFDENEKATMKALTEASELRAQKKLVEGMLHRVEEELQSTKVDYEEKLNDLSNQIDTMTVQIRQMLVEIEDKSKKLENQTKLGEQVNSDFSEKIDMLQADNEKLKVEILHLSEQVEGKEILRSDLELMKKSVEESERQLHRGTVERNEFMSTIALLKKEMEDSLNELNKMRNLKDEKEEEATILKSELEAIRAQCSDLKQSLFEDEAEKEKLRKQISQLKSEIKKKGDALTGIEKRFRDSNGRTQLSDGTKTIPINKRNSSSPQNSKEMASLREKIKMLEGLIKSKEAALETSKTSSMEKEKELQTRIVELENKVEEFNEYVNLHKVNSY 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00229 979 Coils Coil 736 763 - -
Car08g00229 979 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Car08g00229 979 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 976 - -
Car08g00229 979 Coils Coil 918 938 - -
Car08g00229 979 MobiDBLite consensus disorder prediction 892 918 - -
Car08g00229 979 MobiDBLite consensus disorder prediction 196 216 - -
Car08g00229 979 MobiDBLite consensus disorder prediction 242 288 - -
Car08g00229 979 MobiDBLite consensus disorder prediction 196 211 - -
Car08g00229 979 Coils Coil 283 336 - -
Car08g00229 979 Coils Coil 633 653 - -
Car08g00229 979 Coils Coil 484 518 - -
Car08g00229 979 Coils Coil 802 878 - -
Car08g00229 979 Coils Coil 767 787 - -
Car08g00229 979 MobiDBLite consensus disorder prediction 889 919 - -
Car08g00229 979 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 145 IPR019448 -
Car08g00229 979 Coils Coil 943 970 - -
Car08g00229 979 Coils Coil 665 728 - -
Car08g00229 979 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 976 - -
Car08g00229 979 Coils Coil 548 628 - -
Car08g00229 979 Coils Coil 140 167 - -
Car08g00229 979 MobiDBLite consensus disorder prediction 249 288 - -
Car08g00229 979 Coils Coil 381 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00229 Car-Chr8 1823467 1829056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00229 - - gmx:100792602 1352.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00229 08 1823467 1829056 Car08g00229 08 1823467 1829056 ECH
Car08g00229 08 1823467 1829056 Car06g00542 06 5489802 5494491 PCT