Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00542 ATGTTCAAATGGAGGAGCGACAAAAACAGAGTCAAAACTGTTTTCAAACTCCACTTCCATGTCACTCAGGTGCTACAATCTGGGGTGGATTCTTTGGCTCTTTCTATAGTTCCTGGTGATATTGGAAAACCAACAACAAGATTGGAGAAAGCTACAGTGAATGGTGGAATTTGTAAATGGGAAAACCCTGTCTATGAAACTGTTAAATTTATTCAGGACCCTAAGAATGGGAAGTTCAGTGATAAAATTTATTATTTTGTGCTTTCAATGGGATTATCAAAAGCTAGCAGCATCTTTGGAGAAGTTTCCATTGACTTTTCTGATTATGCAGAAGCtacaaagctctcttctatttctcttcctgttaagaattcacaTTCGGATGCTGTCTTACATGTTAATTTTCTTCTTGTTTTAAATAACATTTGCAGAGAGGAAGAGGAATGTGAAGATACCAAGCTAAAAACTAATGATAGGAGCTTAAGGACCTATTTAAGCAATGGAAATGCAGATGGATGCACTAAAAGTGATTCTTCTGAAGATGTGTCTGCCAATGTAAACACAGATAGAGCTGGATTGAGTGCTGATTGTAGGACATCTAGTGGATCTGACATTACATTGTCAAGTTCGGATGGAAGTTTTGGACCCGATACTCCCCGAGAACTTGGACTAAGAAATACTATCATCTGCACCACCACGAATGATTTTCCTTCAGTCGCCATCCACACTTCAGAGCCTCAAAAGCCTGCTGTAAATGCCTCGGCATCGATGTACGATGTACAACAGAGATCATCACAATGGGACTGCTCAGCTGGTTCAGAACATGGTCTGAGTACGGACGGTTCAACACATGGCTCTCAGGATTCCCTTCCTAGGGAAAAATCTCATCAGGCATTAGGTATAGAGAATGAAAAGCTCAAGGCTGAACTTGCTGCTTTGGCCAGACAGGTGGATGTGTCAGACATGGAACTTCAGACTCTTCGGAAGCAAATCGTGAAGGAAAGCAAAAGAGGGCAGGAGCTTGCAAAGGAAGTCACTAGCTTGAAAGATGAAAGAGATACACTCAAGAAAGAATGTGAAAATCTCAGGTCTTTTCGCAGTAGAATGGACAAGGCCAAAGTGAGTAGCAGGTCACAGTTGGATAGTGGGGATCTTCATACTCTTGTTGAAGAAATCAGACAAGAATTGAGTTACGAGAAGGACTTGAATGCAAATCTTAGACTACAGTTAAAGAAGACACAGGAATCGAATGCTGAACTAGTTCTCGCTGTTCAGGACCTCGATGCAATGTTGGAGCAGAAAAATAGGGAAACACATGGTGTTTCCAATAATTTCAAACAGACTAATAAAAACTCTCGTGAGTTAGGGAGAAGCCTCTCTAGTTGTGAAACAGACGATGATGAAGAACAAAAAGAATTGGATGAGCTTGTTAAGGAGCAAAGCAGTCCCAAGGAGACACACTTACTTGAGCAAAAAATTATGGATCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGACGAGTTAGAGATGCAGATGGAGCAGCTTGCTCTGGACTATGAGATTTTGAAACAGGAAAACCATGACATCGCATATAAGCTTGAACAGAGTGAATTGCAAGAACAGTTAAAAATGCAGTATGAGTGCTCTTCTCCTCCTCCTGCCATAGATGACTTCGAAACACATATTCAGAGTCTCGAAAATCAACTCAAAAAACAGTCAGAAGAATTCTCAAATTCTCTTGCAACCATCGAGTCTCTGGAGAACCAAATCAGAAAATTAGAGGAGGAACTGGAGAAACAAGCCCAAGGATTTGAAGTTGACTTAGATGCAGTGACACATGACAAACAAAGAGCCATTCGTGCAGAGGAAGCTTTGCGGAACACCAGACATAAAAATGCTAATACCGCTGAGAGGCTTCAAGAAGAGTTTAAAATGCTATCAATGCAAATGGCCATGACATTCGATGCAAATGAAAGGGCAACCATGAGAGCGATGACAGAAGCAAGTGAACTTCGTGCGCAAAAAAGACTACTGGAGGAAATGCTGCGTAAAGTCAAAGAAGAGCTTCAGTCAGTCAAAGCTGATTATGAGGTAAAACTGAATGAACATTCCAACAAAGTAGATAATATGACAGTTCAGATGAAACAGATGTTGATGGAAATGGACAACCAGGAGCAAGTTGGCAAGGATTTCTCCGAGGAGAACCAGTTGCTAAAAGCTGAGAATGAAAAGCTTACTGTGGAGATCTCATGCTTATCTGAGCAAGTAAAAGAAAAAGAAACCTTAAGATTTGACTTGGAACTTGTGAAGAAATCACTTGAGGAATCTGAGAACCTGTTACAAAGTGTAAAGGAAGAAAGAAATGAGCTTGTGAGTACAATTGCTTTGTTGAAAAAGGAAGCAGAACGGTCACTTGATGAGCTAAATAGGATGATGCATCTCAAGGATGAAGAAGAGAAAGTGAGTAAACACTTGCATTCAGAGTTAGAAGCACTTGAGGCTCAATATAGTGACCTGAAACGTTCTCTTATTGATGATGAGACTGAGAAAGAAAAACTAAGAAAGCAAATTTTCCTTCTTAATGGCGAACTGAAGAAGAAGGACGATGCATTAACCAACTCCGAGAAGAGGTACAAGGATATTAATGGATGCACACAGAATTCCAATGAAATGACAAATCAAAGAGAGGAAATAAAAATGCTCGAGGACCAGATAAAGTCAAAGGAGACTGCCTTGGAAACATTAGCTTCTTCATTTTTGGAGAAGCAAAGGGAATTTCAAAACAAAATTGAGAAACTGGAGGACAAAGTGGAGGTACTCAACCAGAGCATTGTTTTGCAAAAGGCTGTTGCAGATAAGAGTTTTACTACTACAAGTGACAGATCTGGAGAAGTCAGAAGTACAGTTGAGCATCTCAACAATACGACATGTGTCTCGGAAGAAAATGGGGTTGTCTTATCATCATTCAAGAGTCATGCACATTTGTCAGAGAAAGAAGCAGAAATACCCGTAATTGATAATAATGGCGATGACAGTGTCGGCGGTGTTTTAACTGAATTATCATCAATGAACGAAAGAAACAAATCAATGGAAACCGAACTGAAAGAGTTGCAAGAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACAGTAAGAAGCCTCAAGAATGCTAGGAGGGGCTAA 3222 0.396 MFKWRSDKNRVKTVFKLHFHVTQVLQSGVDSLALSIVPGDIGKPTTRLEKATVNGGICKWENPVYETVKFIQDPKNGKFSDKIYYFVLSMGLSKASSIFGEVSIDFSDYAEATKLSSISLPVKNSHSDAVLHVNFLLVLNNICREEEECEDTKLKTNDRSLRTYLSNGNADGCTKSDSSEDVSANVNTDRAGLSADCRTSSGSDITLSSSDGSFGPDTPRELGLRNTIICTTTNDFPSVAIHTSEPQKPAVNASASMYDVQQRSSQWDCSAGSEHGLSTDGSTHGSQDSLPREKSHQALGIENEKLKAELAALARQVDVSDMELQTLRKQIVKESKRGQELAKEVTSLKDERDTLKKECENLRSFRSRMDKAKVSSRSQLDSGDLHTLVEEIRQELSYEKDLNANLRLQLKKTQESNAELVLAVQDLDAMLEQKNRETHGVSNNFKQTNKNSRELGRSLSSCETDDDEEQKELDELVKEQSSPKETHLLEQKIMDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKMQYECSSPPPAIDDFETHIQSLENQLKKQSEEFSNSLATIESLENQIRKLEEELEKQAQGFEVDLDAVTHDKQRAIRAEEALRNTRHKNANTAERLQEEFKMLSMQMAMTFDANERATMRAMTEASELRAQKRLLEEMLRKVKEELQSVKADYEVKLNEHSNKVDNMTVQMKQMLMEMDNQEQVGKDFSEENQLLKAENEKLTVEISCLSEQVKEKETLRFDLELVKKSLEESENLLQSVKEERNELVSTIALLKKEAERSLDELNRMMHLKDEEEKVSKHLHSELEALEAQYSDLKRSLIDDETEKEKLRKQIFLLNGELKKKDDALTNSEKRYKDINGCTQNSNEMTNQREEIKMLEDQIKSKETALETLASSFLEKQREFQNKIEKLEDKVEVLNQSIVLQKAVADKSFTTTSDRSGEVRSTVEHLNNTTCVSEENGVVLSSFKSHAHLSEKEAEIPVIDNNGDDSVGGVLTELSSMNERNKSMETELKELQERYSEMSLKFAEVEGERQKLVMTVRSLKNARRG 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00542 1073 Coils Coil 459 479 - -
Car06g00542 1073 MobiDBLite consensus disorder prediction 193 219 - -
Car06g00542 1073 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 136 IPR019448 -
Car06g00542 1073 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1073 - -
Car06g00542 1073 Coils Coil 557 605 - -
Car06g00542 1073 MobiDBLite consensus disorder prediction 436 458 - -
Car06g00542 1073 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 1 1073 - -
Car06g00542 1073 ProSiteProfiles C2 NT-type domain profile. 3 139 IPR019448 -
Car06g00542 1073 MobiDBLite consensus disorder prediction 264 286 - -
Car06g00542 1073 Coils Coil 296 365 - -
Car06g00542 1073 MobiDBLite consensus disorder prediction 264 293 - -
Car06g00542 1073 Coils Coil 886 952 - -
Car06g00542 1073 Coils Coil 670 729 - -
Car06g00542 1073 Coils Coil 417 437 - -
Car06g00542 1073 Coils Coil 768 858 - -
Car06g00542 1073 MobiDBLite consensus disorder prediction 193 215 - -
Car06g00542 1073 Coils Coil 1022 1056 - -
Car06g00542 1073 Coils Coil 737 764 - -
Car06g00542 1073 Coils Coil 493 527 - -
Car06g00542 1073 MobiDBLite consensus disorder prediction 435 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00542 Car-Chr6 5489802 5494491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00542 - - gmx:100819574 1411.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00542 06 5489802 5494491 Car06g00542 06 5489802 5494491 ECH
Car08g00229 08 1823467 1829056 Car06g00542 06 5489802 5494491 PCT