Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00220 ATGGGACTCCTTTACCTGAAAGGAAAATTAGGTTCATCATCCATGTTTTTAGGGAAGGTGGACTCAAACCAAAGGAAAGGTTCTTGTTTTAAATTGTCTTCCCTTTGTAGTGGTTCAGTTCATTATCAATTTTTGTATAAAGACAAAGCCATAGCAAGATACAGAAGGGGTAGAAGTGTCATTGTTGCTACTGGACCAGCCACAGAGGCTCATGCTATTGCCACTGAGCCATTAACAAAAGATGATTTAATTGATTACATGCTATCTGGTTGCAAGCCAAAAGAGAAGTGGAGAATAGGTACAGAGCATGAGAAgtttggttttgagtttgatagtttacgtccaatcaaatacaaccaaatatcagctttactcaatagTATTGCTGCGAGGTTTGATTGGGATAAAATTATGGAAGGTGACAACATCATAGGACTCAAAACCGGAAACCAAAGCATATCATTGGAGCCTGGTGGTCAAATTGAACTTAGTGGTGCACCTTTGAAAACATTGCATCAAACTTATGATGAGATCAATTCACACCTCTATCAGGTTAAAACTGTTGCAGAGGAAATGAGAATTGGATTTTTGGGACTAGGGTTTCAGCCTAAATGGAGACTTGATGACATACCACATGTGCCCAAGGTACGTTATGACATTATGCAAAATTACTTCAGAAAATTTGGATTACTTGGTGTCCATTCATTATTAATGACATGCTCTGTTCAGGTCAATTTGGATTTCAGTTCTGAAGCAGACATGATCAAGAAAATGCGTGCCAGTCTTGCATTACAACCATTAGCGACAGCCTTATTTGCAAATTCACCTTTCAAGCAAGGAGTTCCAAACGGTTATGCCAGTTTTAGAAGTTATTTGTCAAGTCAATTTGACAAACATCGCAGTGGAATGCTCCCATTTGTTTTTTGTGAAACTTTTGGATTTGAGCAGTTTGTTGATTATGCACTTGATGTACCGATGATATTTGTTTATCGAAAAAATAAATATATTGCCTGCACTGGCATGTCATTTCGGGACTTTATGGCTGGTAAAGTGTCTGTCATTAGAGGTCAAATGCCAACACTAAGTGACTGGGAAAATCACCTCACAACAATATTTCCTGAGGTGAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATGGGGGCTCTTTGAACATGTTATGTGCTTTGCCAGCTTTTTGGGTAGGTCTACTCTATGATGAAGTTTCATTACATAATGTTCTAGATATGATTGGTGATTGGTCTACTGAAGATAGACAATATTTAAGAAATCAGGTTCCTTTTACCGGTTTAAGGACTCCATTTCAAGGTAGATTGCTGCAACATGTTGCTGAAGATGTGTTGAAGTGGGCAAAGGATGGCTTGGACAGAAGATGTTTAAACGAATCCGTTTTTTTAGATCCATTGATGGAAGTGGTTGAAACAGGTATCTAA 1455 0.3691 MGLLYLKGKLGSSSMFLGKVDSNQRKGSCFKLSSLCSGSVHYQFLYKDKAIARYRRGRSVIVATGPATEAHAIATEPLTKDDLIDYMLSGCKPKEKWRIGTEHEKFGFEFDSLRPIKYNQISALLNSIAARFDWDKIMEGDNIIGLKTGNQSISLEPGGQIELSGAPLKTLHQTYDEINSHLYQVKTVAEEMRIGFLGLGFQPKWRLDDIPHVPKVRYDIMQNYFRKFGLLGVHSLLMTCSVQVNLDFSSEADMIKKMRASLALQPLATALFANSPFKQGVPNGYASFRSYLSSQFDKHRSGMLPFVFCETFGFEQFVDYALDVPMIFVYRKNKYIACTGMSFRDFMAGKVSVIRGQMPTLSDWENHLTTIFPEVRLKRYMEMRGADGGSLNMLCALPAFWVGLLYDEVSLHNVLDMIGDWSTEDRQYLRNQVPFTGLRTPFQGRLLQHVAEDVLKWAKDGLDRRCLNESVFLDPLMEVVETGI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00220 484 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 87 484 IPR035434 GO:0004357|GO:0006750
Car08g00220 484 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 77 483 IPR011556 GO:0004357|GO:0006750
Car08g00220 484 Gene3D - 63 484 - -
Car08g00220 484 Pfam Glutamate-cysteine ligase family 2(GCS2) 131 421 IPR006336 GO:0004357|GO:0042398
Car08g00220 484 SUPERFAMILY Glutamine synthetase/guanido kinase 89 481 IPR014746 GO:0003824
Car08g00220 484 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 87 484 - -
Car08g00220 484 PIRSF GCL 65 484 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00220 Car-Chr8 1730781 1735994 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00220 K01919 - gmx:100775188 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00220 08 1730781 1735994 Car08g00220 08 1730781 1735994 ECH
Car08g00220 08 1730781 1735994 Car06g00530 06 5404096 5411927 PCT