Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00030 ATGAAGGTTTGGAGGTTTTCCGTGTTTTTCTTTGTAGCTTTTCTGTTGCTTACTCTTTCAATGGCGAGATTCGTTGTGGAGAAGAACAGCTTGTCGGTTACTTCGCCTGATAAAATTAAAGGCAGACACGACAGTGCCATCGGTAACTTCGGTATACCTCAATACGGAGGTAGCATGGCCGGTACCGTCGTTTATCCAAAAGATAACAATAAGGGTTGTAAAGACTTCGATCAATCTTTCAAATCTCGCCCCGGTGCTCTTCCCACCATCCTTTTGCTCGATCGTGGAAATTGCTTCTTTGCTTTGAAGGTATGGAATGCCCAAAAGGCTGGAGCTTCTGCAGTTCTTGTTGCAGATGATATAGAGGAACCCTTAATAACTATGGACACACCCGAAGAGGATGGTTCGTCTGCAAAATACATTGAGAACATAACAATACCATCTGCTCTCATTGAAAAGAGTTTTGGTGAGAAGTTAAAGGATGCCATAAGTGGTGGGGATATGGTCAATGTAAATCTTGACTGGAGAGAGGCTGTTCCGCACCCTGACGATCGTGTCGAGTATGAGTTGTGGACCAATAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTAATTGAATTTTTGAAGGATTTCAAGGGTGCTGCACAGATCTTAGAGAAAGGAGGTTACACTCAGTTTACACCTCATTATATAACTTGGTACTGTCCTCACGCGTTCACATTGAGTAAACAGTGTAAGTCTCAATGTATAAACCATGGAAGATATTGCGCTCCGGATCCTGAGCAGGACTTCAGCACAGGTTATGATGGGAAAGATGTGGTTGTTGAAAACTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAAGGAAACAGAGAAGTCTTGGGTGTGGTGGGACTATGTCACTGATTTTCAAATTAGATGCCCGATGAAGGAGAAAAAGTACAATAAGGAATGTGCGAACACCGTCATTAAATCTCTGGGTCTTGACATCGAAAAGATTGATAAGTGCATGGGAGATCCTGAAGCCGATACTGAAAATTCCATTTTGAAAGAAGAGCAAGATGCCCAAATTGGGAAGGGATCACGTGGTGATGTTACCATATTGCCTACTCTTGTTGTCAATAACAGACAATATCGAGGTAAACTGGAGAAAGGTGCCGTTCTAAAGGCTATTTGTTCTGGGTTTGAGGAAACTACCGAACCAGCTGTTTGTTTGAGCAATGATGTGGAGACAAATGAGTGCCTGGCAAACAACGGTGGTTGTTGGCAGGATAAAGCGGCTAATATCACTGCATGCAAGGATACATTCCGTGGGCGAGTATGCGAATGCCCCCTGGTTGGTGGTGTTCAATTTAAAGGAGACGGTTATACGACTTGTGAAGCTGGTGGACCTGGGCGTTGCAAGATTAACAATGGAGGCTGTTGGCATGATGCTCGGAATGGACATGCATATTCTGCTTGTTTGGATGATGGAGGAGTTAAATGCCAGTGTCCTACAGGGTTTAAAGGTGATGGTGTAAAAAACTGTGAAGACATTGATGAATGCAAAGACAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACTTGGGGCAGCTATAACTGCAGTTGTAGGGGAGATCTGCTGTATATCAAGGACCAAGATACCTGCATCAGTAAAACTGCCAGTCAGGGAAGATCCACTTGGGCTGCTTTTTGGGTCATTCTGATTGGCTTGGTTATGATTTCTGGAGGGGCATTCCTTGTGTACAAATATAGAATTAGGCAATACATGGATTCTGAAATCAGAGCAATCATGGCACAATATATGCCCTTGGACAGCCAAGCAGAAGTTCCAAATCATGTCAATCATCAAAGAGCTTGA 1872 0.4338 MKVWRFSVFFFVAFLLLTLSMARFVVEKNSLSVTSPDKIKGRHDSAIGNFGIPQYGGSMAGTVVYPKDNNKGCKDFDQSFKSRPGALPTILLLDRGNCFFALKVWNAQKAGASAVLVADDIEEPLITMDTPEEDGSSAKYIENITIPSALIEKSFGEKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLIEFLKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVVENLRQLCVFKVAKETEKSWVWWDYVTDFQIRCPMKEKKYNKECANTVIKSLGLDIEKIDKCMGDPEADTENSILKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSNDVETNECLANNGGCWQDKAANITACKDTFRGRVCECPLVGGVQFKGDGYTTCEAGGPGRCKINNGGCWHDARNGHAYSACLDDGGVKCQCPTGFKGDGVKNCEDIDECKDKKACQCPECSCKNTWGSYNCSCRGDLLYIKDQDTCISKTASQGRSTWAAFWVILIGLVMISGGAFLVYKYRIRQYMDSEIRAIMAQYMPLDSQAEVPNHVNHQRA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00030 623 Gene3D Laminin 516 555 - -
Car08g00030 623 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 15 602 - -
Car08g00030 623 Gene3D Glutaredoxin 234 395 - -
Car08g00030 623 CDD PA_VSR 49 173 - -
Car08g00030 623 Gene3D Laminin 405 461 - -
Car08g00030 623 Gene3D Laminin 466 515 - -
Car08g00030 623 ProSitePatterns Calcium-binding EGF-like domain signature. 512 538 IPR018097 GO:0005509
Car08g00030 623 SUPERFAMILY PA domain 86 169 IPR046450 -
Car08g00030 623 SMART egfca_6 512 554 IPR001881 GO:0005509
Car08g00030 623 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 15 602 - -
Car08g00030 623 ProSitePatterns EGF-like domain signature 2. 496 510 IPR000742 -
Car08g00030 623 Pfam Complement Clr-like EGF-like 495 515 IPR026823 -
Car08g00030 623 CDD EGF_CA 512 541 - -
Car08g00030 623 Pfam PA domain 60 159 IPR003137 -
Car08g00030 623 Gene3D - 21 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00030 Car-Chr8 279147 283712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00030 22 623 Miscellaneous Gene Families AT2G14740 83.636 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00030 - - gmx:100820115 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00030 08 279147 283712 Car08g00030 08 279147 283712 ECH
Car08g00030 08 279147 283712 Car04g01417 04 14434295 14440277 PCT