Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03433 ATGTCAGGGTTGTATAATCCCAACTTCTCTCCCGTGAGAGCTGCTTCTCCTCAGATTAGAACAACTCCAATCACAGCTCCAGACATGGATAGTCAGTACTTGTCGGAGTTGCTGGCAGAGTATCAGAAACTTGGACCCTTCATCAAAGTCCTTCCCAACTCCAGTCGTCTCTTGAATCAAGAAATATTAAGAGTTTCTGCAATTTTGTCCAACCAAGGTTTTGGTGACTTTGACAGACTGCGACATAGAAGCCCTAGTCCCATGGCTTCTTCAAACCTCATGTCAAATCAGAGATTTTGTGGAACTCCTGGAATGACAATGGACTGGCAAGGCGCGCCTGCAAGTCCTAGTTCATATACTGTTAAAAGGATTTTGCGCTTGGAAATTCCAGTTGACACATACCCTAATTTCAATTTTGTTGGAAGACTTCTGGGACCTAGAGGCAATTCTCTGAAACGGGTAGAAGCTACTACAGGTTGCAGGGTGTTTATTAGAGGAAAGGGGTCAATAAAGGATCCAGACAAGGAAGAAAAGTTAAGAGGACGACCGGGATATGAGCATCTCAATGAGCCACTCCACTTATTGATTGAGGCTGACTTACCTGCTAATATTGTTGAGATAAGGCTTAGGCAGGCTCAGGAAATTATAGAAGAATTGCTCAAACCTGTGGATGAGTCACAGGACTTCATCAAGAGGCAGCAGTTGCGGGAATTGGCATTGCTGAATTCGAATTTGGGAGAAGAGAGTCCTGGGCCAAGTGGTAGTGTGTCTCCATTTAATTCTAGTGGAATGAAGCGAGCAAAAACTGGTAGATGA 816 0.4424 MSGLYNPNFSPVRAASPQIRTTPITAPDMDSQYLSELLAEYQKLGPFIKVLPNSSRLLNQEILRVSAILSNQGFGDFDRLRHRSPSPMASSNLMSNQRFCGTPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHLLIEADLPANIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNLGEESPGPSGSVSPFNSSGMKRAKTGR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03433 271 MobiDBLite consensus disorder prediction 246 271 - -
Car07g03433 271 Pfam Homodimerisation region of STAR domain protein 27 76 IPR032377 -
Car07g03433 271 MobiDBLite consensus disorder prediction 243 271 - -
Car07g03433 271 Gene3D K Homology domain, type 1 25 252 IPR036612 GO:0003723
Car07g03433 271 CDD SF1_like-KH 126 242 - -
Car07g03433 271 ProSiteProfiles Type-1 KH domain profile. 138 195 - -
Car07g03433 271 Pfam KH domain 138 174 IPR004088 GO:0003723
Car07g03433 271 PANTHER STAR PROTEIN, HOMODIMERIZATION REGION-RELATED 2 271 - -
Car07g03433 271 PANTHER RNA-BINDING PROTEIN RELATED 2 271 IPR045071 -
Car07g03433 271 SMART kh_6 121 217 IPR004087 GO:0003676
Car07g03433 271 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 128 245 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03433 Car-Chr7 62405718 62409501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03433 K14945 - gmx:100797384 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01433 03 59632250 59637229 Car07g03433 07 62405718 62409501 PCT