Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01433 ATGTCAGGTTTGTATAATCAAAACTTCTCACATGCTAGAGCAGCTTCTCCTCAGATTAGAACCAACTCTGAAGTTGACAGTCAATATTTATCAGAGTTGCTGGCAGAACATCAAAAGCTTGGACCTTTTTTGCAAGTGCTTCCTATATGCAGCCGCCTCTTGAATCAAGAAATATTAAGAGTTTCTGGAATGTTGTCGAACCAAGGTTTTGGTGACTTTGATAGACTTCAGCATAGAAGTCCGAGTCCCATGGCTTCTTCAAACCTCATGTCAAATGTCTCCGGGACAGGAATGGCCGCATGGAATAGTCTTCAGCAAGAGAGATTATGTGGACCACCTGGAATGACGATGGACTGGCAAAGTGCACCTGCAAGTCCGAGTTCATTCACGGTTAAGAGAATATTGCGTTTGGAAATTCCAGTTGATACATTCCCCACTTTTAATTTTGTTGGAAGACTTCTGGGGCCTAGAGGCAATTCTTTGAAACGGGTAGAAGCTACAACTGGTTGCCGCGTTTATATTAGAGGAAAAGGATCGATAAAAGATCCAGACAAGGAAGAAAAATTACGAGGAAGACCAGGCTATGAGCATCTGAATGAACCTCTACACATATTGATTGAGGCTGATTTACCTGCTAATATTGTTGACATGAGGCTCAGACAAGCTCAGGAAATCATAGAAGAACTGCTCAAACCTGTGGACGAGTCCCAAGACTTCATTAAGAGGCAGCAGTTGCGCGAGTTAGCTCTACTGAATTCAAATTTCAGAGAAGAGAGTCCCGGGCCAAGTGGCAGTGTGTCCCCATTTAATTCAAGTGGAATGAAACGTGCAAAACCGGGCCGCTGA 846 0.4362 MSGLYNQNFSHARAASPQIRTNSEVDSQYLSELLAEHQKLGPFLQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGMAAWNSLQQERLCGPPGMTMDWQSAPASPSSFTVKRILRLEIPVDTFPTFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKPGR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01433 281 PANTHER STAR PROTEIN, HOMODIMERIZATION REGION-RELATED 2 281 - -
Car03g01433 281 CDD SF1_like-KH 136 256 - -
Car03g01433 281 Pfam Homodimerisation region of STAR domain protein 26 72 IPR032377 -
Car03g01433 281 MobiDBLite consensus disorder prediction 253 281 - -
Car03g01433 281 SMART kh_6 131 231 IPR004087 GO:0003676
Car03g01433 281 MobiDBLite consensus disorder prediction 256 272 - -
Car03g01433 281 Gene3D K Homology domain, type 1 19 262 IPR036612 GO:0003723
Car03g01433 281 ProSiteProfiles Type-1 KH domain profile. 148 205 - -
Car03g01433 281 Pfam KH domain 148 184 IPR004088 GO:0003723
Car03g01433 281 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 138 256 IPR036612 GO:0003723
Car03g01433 281 PANTHER RNA-BINDING PROTEIN RELATED 2 281 IPR045071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01433 Car-Chr3 59632250 59637229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01433 K14945 - gmx:100816420 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01433 03 59632250 59637229 Car03g01433 03 59632250 59637229 ECH
Car03g01433 03 59632250 59637229 Car07g03433 07 62405718 62409501 PCT