Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03425 ATGCAAATGAGGACAAAGCTTACTTTTTTATTGTGTGTTTGGATTTTCCTTTGTGGGTCTTGTGTAGGAAGATTTGTCGTAGAAAAAAACAATTTAAAAATAACTTCTCCAAAATCATTGAGAGGTATATATGAATGTGCAATTGGAAATTTTGGGGTTCCAAAGTATGGAGGAACCATGATTGGAACAGTTGTGTATCCAAAGTTTAATCGGAATGGATGCAACAAATTTAATGATGGAGATACATCTTTGACTTCCAAGCCCGGAAGCTTCCCCACCTTTGTTCTTGTTGATCGTGGAGACTGTTATTTCACTTTAAAGGCATGGAATGCTCAGAATGGTGGAGCAGCAGCTATTCTAGTTGCAGATGATAGAATTGAACCATTGATCACAATGGACACTCCTGAAGAAGGGAATGGTGCTAATGATGATGATTACATCGAAAAGATTACAATTCCTTCTGCTCTTATAAGCAAATCACTAGGCGATAATATCAAGATGGCTCTCTCAAGTGGAGCAATGGTGAATGTAAATCTTGATTGGAGAGAGGCACTTCCACACCCTGATGAGAGAGTTGAGTATGAGTTATGGACAAGTAGCAATGATGAGTGTGGTCCAAAATGTGAGAGTGAAATTAATTTTTTGAAGAGTTTCAAAGGTGCTGCTCAACTACTTGAGCAAAAAGGGTATACTCAGTTTACTCCTCACTATATAACATGGTATTGCCCAGAAGCATTTGTCTTAAGCCAACAGTGCAAATCTCAGTGTATTAATAATGGGAGGTACTGTGCACCAGATCCTGAGCAAGATTTTAGTAGAGGGTATGATGGAAAAGATGTTGTTCTTCAGAACTTGCGCCAAATTTGTTTCTTTAAAGTGGCAAATGAAAGTGGTAAGCCTTGGCAATGGTGGGATTATGTTACCGACTTTGCAATCCGATGTCCGATGAGAGAGAATAAATACAATGAAGAATGCTCTGATCAAGTTATTAAATCTCTTGGTGTTGATTTGAACAAGATTAAAGAATGTATTGGGAATCCTCGTGCAGATGTTGAAAGCCCTATTCTTAAGGCTGAACAGGATGCACAGATAGGCCAGGGGTCTCGTGGTGATGTTACTATACTTCCCACTCTTGTTATTAACAACAGACAGTATAGAGGTAAGCTGTCAAAAGCAGCAGTTCTGAAGGCAATATGTGCAAGTTTTCAAGAGACCACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTTTGGCAAACAATGGTGGTTGTTGGCAGGACAAAGCTGCTAACATTACTGCTTGCAGGGACACTTTCCGAGGAAGAGTATGTGAATGTCCTATTGTACAAAATGTGAAGTTTGTTGGTGATGGATATATTCACTGTGAAGCAAGTGGAGCGTTGAGGTGTGCAATCAACAATGGAGGTTGTTGGCAGGGAGCACAAGGAGGCAGGGCATACTCTGCATGTATAGATGACCATACAAAAGGTTGTAAGTGTCCACCTGGATTCAGAGGTGATGGAGTCCACTCTTGTGAAGATGTGGACGAGTGCAAAGAGAAATTGGCTTGTCAGTGCCCAGAGTGCAGCTGCAAAAATACATGGGGGAGTTATGAATGCAGATGCAGTAATGATTTGTTCTATGTGCGAGAAAGTGACATGTGTATTGGTAAATATAGCTCTAATTCTTCTGTCTCTGGTGGAGGATTTGTTTGGATGCTTATTCTCATCTTAGCTATTGCTGCTGCTGGGGGATATGCATTCTACAAGTACAGAATCCAGAGATATATGGACTATGAGATAAGGGCAATAATGGCACAATACATGCCGTTGGATAATCAAGCAGAGAACGGTAATCAAGTTCAGCATGCTGTGTAG 1890 0.4042 MQMRTKLTFLLCVWIFLCGSCVGRFVVEKNNLKITSPKSLRGIYECAIGNFGVPKYGGTMIGTVVYPKFNRNGCNKFNDGDTSLTSKPGSFPTFVLVDRGDCYFTLKAWNAQNGGAAAILVADDRIEPLITMDTPEEGNGANDDDYIEKITIPSALISKSLGDNIKMALSSGAMVNVNLDWREALPHPDERVEYELWTSSNDECGPKCESEINFLKSFKGAAQLLEQKGYTQFTPHYITWYCPEAFVLSQQCKSQCINNGRYCAPDPEQDFSRGYDGKDVVLQNLRQICFFKVANESGKPWQWWDYVTDFAIRCPMRENKYNEECSDQVIKSLGVDLNKIKECIGNPRADVESPILKAEQDAQIGQGSRGDVTILPTLVINNRQYRGKLSKAAVLKAICASFQETTEPSICLTPDMETNECLANNGGCWQDKAANITACRDTFRGRVCECPIVQNVKFVGDGYIHCEASGALRCAINNGGCWQGAQGGRAYSACIDDHTKGCKCPPGFRGDGVHSCEDVDECKEKLACQCPECSCKNTWGSYECRCSNDLFYVRESDMCIGKYSSNSSVSGGGFVWMLILILAIAAAGGYAFYKYRIQRYMDYEIRAIMAQYMPLDNQAENGNQVQHAV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03425 629 Pfam PA domain 62 165 IPR003137 -
Car07g03425 629 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Car07g03425 629 SUPERFAMILY PA domain 94 171 IPR046450 -
Car07g03425 629 Gene3D Glutaredoxin 277 402 - -
Car07g03425 629 Gene3D - 22 188 - -
Car07g03425 629 PANTHER VACUOLAR-SORTING RECEPTOR 1 11 609 - -
Car07g03425 629 Gene3D Laminin 472 554 - -
Car07g03425 629 Gene3D Laminin 412 457 - -
Car07g03425 629 CDD EGF_CA 518 546 - -
Car07g03425 629 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 609 - -
Car07g03425 629 SMART egfca_6 518 560 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03425 Car-Chr7 62352558 62355938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03425 6 621 Miscellaneous Gene Families AT3G52850 71.104 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03425 - - gmx:100815266 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01407 03 59342229 59347186 Car07g03425 07 62352558 62355938 PCT