Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01407 ATGAGCATCAAGTTGAATTTTTTGTTGTGTGTTTTGGTTTTGTTGTTGAAGTGTTGTTTGGGAAGGTTTTTGGTGGAGAAGAATAGCTTGAAGATCACTTCTCCAAAATCATTGAAGGGTACATATGAATGTGCAATTGGGAATTTTGGGGTACCTCAATATGGAGGAACATTGGTTGGTTCTGTTGTGTACCCAAATGTGAATCAGAAAGGATGTGACAACTTCACTGATGTCAATGCTTCCTTTCAGTCTAAGCCTGGAGGTTTCCCCACCTTTCTTCTTGTTGATCGTGGAGATTGCTACTTCACTTTGAAGGCGTGGAATGCACAAAATGGTGGAGCAGCAGCTATTCTTGTAGCTGATAACAGAGAAGAAATCCTGATTACCATGGACACTCCTGAAGAAGGGAATGTTGCAAAAGATGATTACATGGAAAAGATCAATATTCCTTCTACTCTTATCAGCAAATCCTTAGGGGATAGTATCAAGAAGGCTCTCTCAAATGGGGAGATGGTTCGCATAAATCTTGATTGGAGAGAGGCTCTTCCGCATCCTGACGATAGAGTTGAGTACGAATTATGGACAAATAGCAACGATGAATGCGGACCAAAGTGTGACAGTCAAATTAATTTTGTGAAAAGCTTTAAAGGAGCAGCTCAGCTACTTGAGAAGAAAGGGTTCACACAATTTTCTCCTCACTATATAACTTGGTATTGCCCTAAGGAATTTCTCTTAAGCCAACAGTGCAAGTCTCAGTGTATAAACAACGGAAGATACTGTGCTCCGGACCCTGAGCAAGATTTCAGTAAAGGGTATGATGGAAAAGATGTTGTTGTTCAGAACTTACGCCAAGCTTGCTTTTTTAAAGTTGCAAATGAAAGTGGAAAGCCTTGGCAATGGTGGGACTATGTGACAGACTTTTCAATCCGTTGCCCCATGAAAGAGAACAAATACACAGAAGAATGCTCAGATCAAGTTATTAAATCCCTTGGTGTCGATCTGAAGAAGATTAAAGACTGTGTTGGAGATCCTCATGCAGATGTTGATAACCCTGTCCTCAAAGCCGAACAGGATGCACAGATTGGCAAAGGTTCTCGTGGTGATGTTACTATACTGCCTACTCTTATTATAAACAACAGACAGTATAGAGGTAAGTTGTCAAAACCAGCCGTTCTCAAGGCAATCTGTGCAGGTTTCCTAGAAACAACCGAACCGTCAATTTGTTTAACTCCAGACATGGAAACAAACGAGTGTTTGGAAAACAATGGCGGTTGTTGGCGGGATAAATCTTCCAACATTACTGCATGCAGGGACACTTTCCGAGGAAGAGTATGTGAATGTCCTATTGTAAAAAATGTAAAGTTTGTTGGCGATGGATATAGTCACTGTGAAGCCTCAGGAACCTTAAGTTGTGAATTCAACAATGGAGGTTGTTGGAAATTAGCCCGGGGTGGGAAGCTTCATTCTGCTTGCCATGATGACTATAGAAAAGGTTGCGAGTGTCCGCCAGGGTTGAGAGGTGATGGAGTCTTGTCATGTGAAGATATTGACGAGTGCAAAGAAAAGCTGGCTTGCCAGTGTCCAGAATGCAAATGCAAAAATACTTTTGGAAGTTATGAGTGCAAATGCGGTAGCGGTTTGCTATACTCACGAGAAAATGACACATGCATTGGTAAATATACTTCTTCAGTGGTGAATATTTGGATGATTATCCTTGTCTTGGTTGTTACCCTTTCTGGAGGATATGCATTCTACAAGTACAGAATCCAGAGATATATGGACTCAGAGATACGTTCGATTATGGCTCAATACATGCCCTTGGATAATCAACCTGAAATCTCTAATCAAGTTCATCACGATATCTAG 1866 0.411 MSIKLNFLLCVLVLLLKCCLGRFLVEKNSLKITSPKSLKGTYECAIGNFGVPQYGGTLVGSVVYPNVNQKGCDNFTDVNASFQSKPGGFPTFLLVDRGDCYFTLKAWNAQNGGAAAILVADNREEILITMDTPEEGNVAKDDYMEKINIPSTLISKSLGDSIKKALSNGEMVRINLDWREALPHPDDRVEYELWTNSNDECGPKCDSQINFVKSFKGAAQLLEKKGFTQFSPHYITWYCPKEFLLSQQCKSQCINNGRYCAPDPEQDFSKGYDGKDVVVQNLRQACFFKVANESGKPWQWWDYVTDFSIRCPMKENKYTEECSDQVIKSLGVDLKKIKDCVGDPHADVDNPVLKAEQDAQIGKGSRGDVTILPTLIINNRQYRGKLSKPAVLKAICAGFLETTEPSICLTPDMETNECLENNGGCWRDKSSNITACRDTFRGRVCECPIVKNVKFVGDGYSHCEASGTLSCEFNNGGCWKLARGGKLHSACHDDYRKGCECPPGLRGDGVLSCEDIDECKEKLACQCPECKCKNTFGSYECKCGSGLLYSRENDTCIGKYTSSVVNIWMIILVLVVTLSGGYAFYKYRIQRYMDSEIRSIMAQYMPLDNQPEISNQVHHDI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01407 621 SUPERFAMILY EGF/Laminin 511 557 - -
Car03g01407 621 Pfam PA domain 60 162 IPR003137 -
Car03g01407 621 ProSitePatterns Calcium-binding EGF-like domain signature. 515 541 IPR018097 GO:0005509
Car03g01407 621 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 8 600 - -
Car03g01407 621 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 8 600 - -
Car03g01407 621 SMART egfca_6 515 557 IPR001881 GO:0005509
Car03g01407 621 Gene3D Laminin 470 557 - -
Car03g01407 621 Gene3D Glutaredoxin 267 398 - -
Car03g01407 621 SUPERFAMILY PA domain 55 169 IPR046450 -
Car03g01407 621 Gene3D - 21 185 - -
Car03g01407 621 Gene3D Laminin 409 454 - -
Car03g01407 621 CDD EGF_CA 515 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01407 Car-Chr3 59342229 59347186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01407 3 621 Miscellaneous Gene Families AT3G52850 69.551 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01407 - - gmx:100807514 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01407 03 59342229 59347186 Car03g01407 03 59342229 59347186 ECH
Car03g01407 03 59342229 59347186 Car07g03425 07 62352558 62355938 PCT