Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03376 ATGGCGACAATTAACCCTTTTGATTTGTTGGGTGACGATGCTGAAGACCCTTCTCAGTTGATTGCCGCTGAACAACAGAAAgctgcggctgcagcggcggcggcggcggctgcTCCAAAAAAGAGTCAAGAACAAGGCAAACCGCAAAAGGCGGCTCAGTTGCCCTCCAAACCACTACCTCCTTCTCAAGCTGTGAGGGAGGCCAGAAACGAGCCTTCTCGCGgtggccgtggaggtagccgtggacgtggatttggacgtggtcgcggCTTCGGTCGTGATTTCTCCAATGATGATAACTCATTCCCTGCATCTGGAGCCCCTGCTCATCAAGGTTCTACCGAAGAAGGAGATTCTGGTAATCCCGCTGAGAGACGTGGTTATGGAGCACCTCGTGGACCTTACCGCGGAGGTGGTGGAGGCGGTCGACGTGGAGGCTTTAGCAATGGAGAAGCTGGTGAAGAGGGACGTCCACGAAGACCTTTTGATCGCCACAGCGGGACTGGGCGCGGAAGTGGATTCAAACGTGAAGGTGCTGGACGAGGCAATTGGGGAACCCAATCTGATGAAATTGCTCAGGTGACTGAGGAAGTTGCTAATGAAACTGAAAAGAATTTGGGTGAAGAGAAGCCTGCTGGTGAGGAAGAAGCAGCAGATGTTAGCAAGGAAACTCCTGCTAATGAAGCTGAAGAAAAGGAACCTGAGGATAAGGAGATGACACTGGAAGAGTATGAGAAAGTGCTGGAAGAGAAAAGGAAAGCCCTGCAGGCACTTAAGACTGAAGGAAGAAAGGTGGATGCTAAAGAGTTTGAATCCATGAAGCCATTGTCGTGCAAAAAAGACAATGTTGAGATCTTTGCTAAATTGGGATCTGACAAGGATAAGCGCAAAGAAGCTTTTGATAAGGAGAAGTCAAAGAAGGCTCTTAGCATTAACGAGTTTCTGAAGCCTGCTGATGGAGAGAAGTTCTACAACCCAggtggtcgtggtggacgtggtggtcgcggtggccgtggttcaaggggaggaggttttggtggAAATGCATACAGCAATGTCCCAGCTCCATCCATCGAGGATCCCGGGCAATTCCCAACCTTGGGTGGTGGCAAGTGA 1116 0.4265 MATINPFDLLGDDAEDPSQLIAAEQQKAAAAAAAAAAAPKKSQEQGKPQKAAQLPSKPLPPSQAVREARNEPSRGGRGGSRGRGFGRGRGFGRDFSNDDNSFPASGAPAHQGSTEEGDSGNPAERRGYGAPRGPYRGGGGGGRRGGFSNGEAGEEGRPRRPFDRHSGTGRGSGFKREGAGRGNWGTQSDEIAQVTEEVANETEKNLGEEKPAGEEEAADVSKETPANEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEGRKVDAKEFESMKPLSCKKDNVEIFAKLGSDKDKRKEAFDKEKSKKALSINEFLKPADGEKFYNPGGRGGRGGRGGRGSRGGGFGGNAYSNVPAPSIEDPGQFPTLGGGK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03376 371 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 370 IPR039764 GO:0003723
Car07g03376 371 MobiDBLite consensus disorder prediction 186 200 - -
Car07g03376 371 Gene3D - 156 269 - -
Car07g03376 371 MobiDBLite consensus disorder prediction 98 118 - -
Car07g03376 371 MobiDBLite consensus disorder prediction 318 371 - -
Car07g03376 371 Pfam Stm1 1 79 IPR019084 -
Car07g03376 371 SMART HABP4_PAI_RBP1_2 158 266 IPR006861 -
Car07g03376 371 MobiDBLite consensus disorder prediction 153 171 - -
Car07g03376 371 Coils Coil 241 261 - -
Car07g03376 371 MobiDBLite consensus disorder prediction 201 240 - -
Car07g03376 371 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 370 - -
Car07g03376 371 Pfam Hyaluronan / mRNA binding family 158 265 IPR006861 -
Car07g03376 371 MobiDBLite consensus disorder prediction 31 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03376 Car-Chr7 61860437 61863702 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03376 K13199 - gmx:100791259 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03376 07 61860437 61863702 Car07g03376 07 61860437 61863702 ECH
Car07g03376 07 61860437 61863702 Car03g01702 03 62864445 62868544 PCT