Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01702 ATGGCCACTATGAACCCTTTCGATTTGCTTGGTGATGATGCTGAGGATCCTTCTCAGCTTATCGTAGCCGAACAACTCAAAGCTGCTGCGGCTCCTCCTAAGAAGCCCGCTGTTCAGGAACAGGGCAAGCAACGTGCCGCTCTGCCGAATAAGCCGGCTCAGCTACCTTCTAAGCCAACTCCTCCGGCTCAAGCTGTGAGGGAGTCCAGAAATGAAGGAGGCCGTGGTGGTCGTGGATACGGTGGTGGTCGTGGAGGTGGTCGTGGATATGGTGGTGGACGTGGAGGACGTGGTTTCGGTCGTGACTACTCTTCCAACGAAGAAAATTCATTCCCTGTCTCTGGAGCCCCTGGTAGTCAGGGTCCTATTGAAGAAGGCGATGCTGCAAAGTCTTCAGAGAGACGTAGCTATGGTGGACCACGAGGTCCCTACCGCGGAGGTCGCCGTGGAGGTTTCAGCAACGGCGAAGCTGGTGAAGAAGGACGGCCACGTAGAACTTTTGAACGCCGCAGCGGCACCGGGCGAGGAAGTGAATTCAAACGTGAAGGTGCTGGACGTGGTAATTGGGGAACTGAAACTGATGAAATTGCCCAGGTGACTGATGAAGCTGTGAATGAAGCTGAGAAGAAGAGTTCAGGGGATGAGAAGCCTGCAGTCGAAAATGAAGTTGCTGAAGGAAACAAGGACAATCCTGCCAATGAAACTGAAGAAAAAGAGGCCGAAGATAAGGAGATGACTCTTGAAGAATATGAGAAACTTCTAGAAGAGAAAAGAAAGGTCTTGCAAGCACTCAAGACCGAAGCAAGAAAGGTGGACACTAAAGAGTTTGAGTCCATGCAGGCCTTGTCTTGCAAGAAAGATAATACTGAAATCTTTGCTAAACTAGGATCTGATAAGGATAAGCGCAAAGAAGCTCTTGACAAGGAAGAGAAAGCCAAGAAGTCGGTGAGCATAAATGAGTTTCTGAAGCCAGCTGAAGGTGAAGCATATTATAATCCAGGCGGACATGGAAGGGGACGTGGCCGTGCTACACGGGGTGGTATCCGTGGAAACTCATTCAGCAATATACCAGCTCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGGGTGCCAAGTGA 1122 0.5045 MATMNPFDLLGDDAEDPSQLIVAEQLKAAAAPPKKPAVQEQGKQRAALPNKPAQLPSKPTPPAQAVRESRNEGGRGGRGYGGGRGGGRGYGGGRGGRGFGRDYSSNEENSFPVSGAPGSQGPIEEGDAAKSSERRSYGGPRGPYRGGRRGGFSNGEAGEEGRPRRTFERRSGTGRGSEFKREGAGRGNWGTETDEIAQVTDEAVNEAEKKSSGDEKPAVENEVAEGNKDNPANETEEKEAEDKEMTLEEYEKLLEEKRKVLQALKTEARKVDTKEFESMQALSCKKDNTEIFAKLGSDKDKRKEALDKEEKAKKSVSINEFLKPAEGEAYYNPGGHGRGRGRATRGGIRGNSFSNIPAPSIEDPGHFPTLGAK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01702 373 Pfam Hyaluronan / mRNA binding family 163 271 IPR006861 -
Car03g01702 373 Gene3D - 161 275 - -
Car03g01702 373 Coils Coil 233 274 - -
Car03g01702 373 MobiDBLite consensus disorder prediction 27 245 - -
Car03g01702 373 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 373 - -
Car03g01702 373 SMART HABP4_PAI_RBP1_2 163 272 IPR006861 -
Car03g01702 373 MobiDBLite consensus disorder prediction 158 188 - -
Car03g01702 373 MobiDBLite consensus disorder prediction 202 245 - -
Car03g01702 373 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 373 IPR039764 GO:0003723
Car03g01702 373 MobiDBLite consensus disorder prediction 326 373 - -
Car03g01702 373 Pfam Stm1 1 79 IPR019084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01702 Car-Chr3 62864445 62868544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01702 K13199 - gmx:100814825 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01702 03 62864445 62868544 Car03g01702 03 62864445 62868544 ECH
Car07g03376 07 61860437 61863702 Car03g01702 03 62864445 62868544 PCT