Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03162 ATGGATAGTAATTTAAGCAGAAGTATAAGTAGGAGTTTGAGTAGGTCAAGTTGGAAAATGGAAGAAGTGTTTGCAAGTGGTAGGTATTCTAGGAGGACTTCACAAGTTGATGAAGATGAAGAGGCTCTAAAATGGGCTGCAATTGAGAAACTACCAACATATGATAGGTTAAGAACAAGTATCATGCAAACTTTTACTGAGGGTGATCAACCACAACATGGAAACAGGATGCAACATAAGGAAGTTGATGTTAGGAAGCTTGATATGAATGAAAGACAACAAATCATTGACCAAATTTTTAAGGTTGCTGAAGAAGATAATGAAAAGTACCTTAAGAAATTCAGAAACAGAACTGACAAGGTTGGAATCAGACTTCCAACAGTAGAAGTGAGGTTTAAGAATTTGACTGTTGAGGCTGATTCATATGTTGGTAGCAGAGCTTTGCCAACATTACCAAATGTTGCATTAAACATTATTGAATCAGCTATTGGTATGTTTGGTCTTAGTACAGTTAAGAGAACAAAGCTCACAATTCTTAAAAATGCTTCTGGCATTGTTAAACCATCAAGgatggcccttttgttaggtcctccttcttcaggaaaaacaacccttttgttagcattggctggaaagttggactctgaattgagggtaacaggagatattacttacaatggacataaattaaatgagtttgttccaagaaaaacttcagcatatattagccaaaatgatgttcatgttggagaaatgactgttaaagaaactttggatttctcagcaagatgccaaggagttggaactagatatgATCTATTAAGTGAGCTTGCTAGAAGGGAAAAAGAAGCTGGCATATTTCCAGAGGCAGAACTTGACCTTTTCATGAAGGCTACTGCAGTGAAAGGAACAGAAAGCAGTCTCATTACTGACTATACTCTAAAAatattggggcttgatatttgtaaggacacaatagtaggagatgagatgcatagaggtgtatctggaggacaaaaaaagcgtgtgaccacaggtgaaatgatagtgggtccaacaaaaacattgtttatggatgaaatatcaacgggtcttgatagctcaacaacatttcaaatagtgaaatgtttgcagcagattgtgcacctaactgaaggaacaatcttaatgtcacttcttcaaccagctcctgaaacattcaatctctttgatgacattattcttatatcagagggtcaaattgtgtaccaaggtccacgtgaccacattgttgaattctttgaatcatgtggcttccgttgccctgatagaaagggaaccgctgatttcttgcaagaggttacctcaagaaaggaccaagaacaatattgggcagacaaaaacaaaccatacagatatgtaaccgtaacagagtttgcaaacaagttcaaacgattccatgttggaattcgtcttgaacaagaattatctgttccatttgacaagtcaagtgcacacaaagcagctcttgtttacagcaaaaactcagttccaacaaaagatattctcaaagcatgttgggacaaagaatggttacttatcaaaagaaactcttttgtctacatattcaagacagttcaaatttgcatcattgctatcatatcagcaactcttttcttgaggactgaaatgagtagagataatgaagatggtgcttcactttacattggtgcaattttgtttgctatgattatgaatatgttcaatggttttgctgaacttgcacttactattggaaggcttcctgttttttataaacaaagagatcatcttttccatcctgcttggacttacacactccctaatttccttttgaggatacccatttctatgtttgagtctcttgcttggatggttgttacttattacaccataggatttgctcctgaagccagcagGTTTTTTAAGCAATTGTTGTTGGTGTTCCTTATCCAACAAATGGCAGCTGGGATGTTTAGATTCATTGCTGGAGTATGTAGAACAATGATTATTGCCAACACTGGTGGAGCTCTCATGCTTCTTGTTGTTTTTCTACTTGGAGGTTTCCTTGTTCCAAAACGTGAAATTCCTAACTGGTGGGTGTGGGCAAATTGGGTTTCACCATTGACATATGCTTTCAATGCCTTATCTGTGAATGAAATGTTAGCTCCAAGGTGGATGCATCCAGGGTCTTCTTCAGACAAAACTACCACATTAGGTTTGGCTGTGTTAAGGAACTTTGATGTTtttgataaaagttcatggtattggataggtgctgcagctcttgttggattcacagttttattcaatgttctcttcactctttcacttatgtacctaaatcCTCTTGGAAAGAAGCAAGCAATTATATCTGAAGAAGATGCAACGGAATTGGAGGCTGAAGGAGATGTAAACGAACCAAGACTTGTGAGGCCGCCTTCCACCCGAGATTCAATGCTTCGATCACTATCTACAGCTGATGGAAATAATTCAAGAGAAGTAGCCATGCAAAGAATGAGTAGCCAAACTAATCCCAATGGATTAAGAAATGCTGATTCAAACGCTGGAGGTGCCCCAAGAAGAGGAATGATTCTACCTTTTCAACCACTTGCAATGTCCTTTGACAGTGTTAATTACTTTGTGGACATGCCTGCAgaaatgaaagaacaaggagttacagaaagtaggttacaattgcttagggatgtaaccagttcctttaggcctggagttcttacagcgctaatgggagttagcggcgccgggaagacaactttaatggatgttttagctggaagaaagaccggcggatacattgaaggagatgttagaatctctggataccctaagaaccaagaaacctttgcaagagtatctggttactgtgaacaaactgatattcattcgcctcaagtaactatcagagaatctttgatttactcggctttccttcggttacctaaagaagttactgatcatgagaagacaCAAtttgtggaccaagttatggatttggttgagctgcaaagtctcagggatgctattgtggggctgccaggagttacagggttgtcaactgaacaaagaaagcgattgacgatcgcagttgagcttgttgctaatccttcaattatattcatggatgaaccaacttcaggcctagatgcaagagcagcagctattgttatgagagctgtaagaaacactgtggatactggaagaacagttgtgtgcacaattcatcagcctagcattgatatctttgaagcctttgatgagctcttgttgatgaaaagaggagggcaattgatctacgcaggacctttaggccggaattcacacaagatcgtcgaatactttgagtcaattcaaggggttccaaaaatcaaggacatgtacaatcctgcaacatggatgctagaggttagctccatagcagctgaagtccggctcggaatggactttgctgaatactacaagtcatcagctttgttccagagaaacaaagctcttgtgaaggagttaagtacacccccgccgggaactaatgatttgtttttcgccactaagtactcacaatcaacatggggacaattcaaatcttgtctttggaaacagtggttgacatattggaggagtccagattacaaTCTAGTCAGATTTGTTTTCACATTGGCTTGTTCCCTCATGTTAGGATCAGTATTTTGGAAAGTTGGCAAAAACAGGGGGAACTCAACCGACCTATCGCTTGTTATaggagcaatgtatgctgcaattatttttgttggagttaacaattgtcaaacagttcaaccaattgtagccattgaaagaacagtgttctatagagaaagggctgctggaatgtatgctcctttgccttatgccttagcacaggttttcatagaactaccatttgtgctttttcaaacaacatattactcactcatagtgtattctatggtgagctttgaatggaaagtggaaaagttcttttggttcttctttgtcagctacttctccttcttgtacttcacattctatggaatgatgactgtttccatcacaccaaatcatcaagttgcatcaatctttgcagcagccttctatggaatctttaacctcttctctggtttcttcattccaaaaccaaaaattcctggatggtggatttggtattattggatctgtccagtagcatggacagtgtatggattaattgtttcacaatatagagacatagatgatccaattcatgtggttggatccactgcaaacttcactgtcaaaggatatattgaacaccattatgggttcaaacctgatttcatgggtccagttgcaggagttttggttgctttcacttgtttctttgcctttatattttccttctgcatcaaggcactgaacttccaATCAAGATAA 4446 0.1278 MDSNLSRSISRSLSRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYDRLRTSIMQTFTEGDQPQHGNRMQHKEVDVRKLDMNERQQIIDQIFKVAEEDNEKYLKKFRNRTDKVGIRLPTVEVRFKNLTVEADSYVGSRALPTLPNVALNIIESAIGMFGLSTVKRTKLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVTGDITYNGHKLNEFVPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDLFMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPETFNLFDDIILISEGQIVYQGPRDHIVEFFESCGFRCPDRKGTADFLQEVTSRKDQEQYWADKNKPYRYVTVTEFANKFKRFHVGIRLEQELSVPFDKSSAHKAALVYSKNSVPTKDILKACWDKEWLLIKRNSFVYIFKTVQICIIAIISATLFLRTEMSRDNEDGASLYIGAILFAMIMNMFNGFAELALTIGRLPVFYKQRDHLFHPAWTYTLPNFLLRIPISMFESLAWMVVTYYTIGFAPEASRFFKQLLLVFLIQQMAAGMFRFIAGVCRTMIIANTGGALMLLVVFLLGGFLVPKREIPNWWVWANWVSPLTYAFNALSVNEMLAPRWMHPGSSSDKTTTLGLAVLRNFDVFDKSSWYWIGAAALVGFTVLFNVLFTLSLMYLNPLGKKQAIISEEDATELEAEGDVNEPRLVRPPSTRDSMLRSLSTADGNNSREVAMQRMSSQTNPNGLRNADSNAGGAPRRGMILPFQPLAMSFDSVNYFVDMPAEMKEQGVTESRLQLLRDVTSSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGYPKNQETFARVSGYCEQTDIHSPQVTIRESLIYSAFLRLPKEVTDHEKTQFVDQVMDLVELQSLRDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQLIYAGPLGRNSHKIVEYFESIQGVPKIKDMYNPATWMLEVSSIAAEVRLGMDFAEYYKSSALFQRNKALVKELSTPPPGTNDLFFATKYSQSTWGQFKSCLWKQWLTYWRSPDYNLVRFVFTLACSLMLGSVFWKVGKNRGNSTDLSLVIGAMYAAIIFVGVNNCQTVQPIVAIERTVFYRERAAGMYAPLPYALAQVFIELPFVLFQTTYYSLIVYSMVSFEWKVEKFFWFFFVSYFSFLYFTFYGMMTVSITPNHQVASIFAAAFYGIFNLFSGFFIPKPKIPGWWIWYYWICPVAWTVYGLIVSQYRDIDDPIHVVGSTANFTVKGYIEHHYGFKPDFMGPVAGVLVAFTCFFAFIFSFCIKALNFQSR 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03162 1481 Gene3D - 166 479 IPR027417 -
Car07g03162 1481 CDD ABCG_PDR_domain2 876 1114 IPR034003 -
Car07g03162 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 436 IPR003439 GO:0005524
Car07g03162 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 435 IPR027417 -
Car07g03162 1481 Pfam ABC transporter 907 1059 IPR003439 GO:0005524
Car07g03162 1481 Pfam ABC transporter 179 361 IPR003439 GO:0005524
Car07g03162 1481 MobiDBLite consensus disorder prediction 803 838 - -
Car07g03162 1481 MobiDBLite consensus disorder prediction 824 838 - -
Car07g03162 1481 CDD ABCG_PDR_domain1 172 418 IPR034001 -
Car07g03162 1481 Pfam ABC-transporter N-terminal 90 154 IPR029481 -
Car07g03162 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 879 1131 IPR003439 GO:0005524
Car07g03162 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 1115 IPR027417 -
Car07g03162 1481 SMART AAA_5 916 1108 IPR003593 -
Car07g03162 1481 SMART AAA_5 188 420 IPR003593 -
Car07g03162 1481 Pfam Plant PDR ABC transporter associated 732 797 IPR013581 -
Car07g03162 1481 Gene3D - 893 1128 IPR027417 -
Car07g03162 1481 Pfam ABC-2 type transporter 394 448 IPR043926 GO:0140359
Car07g03162 1481 Pfam ABC-2 type transporter 1088 1148 IPR043926 GO:0140359
Car07g03162 1481 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1481 - -
Car07g03162 1481 Pfam ABC-2 type transporter 1205 1418 IPR013525 GO:0016020|GO:0140359
Car07g03162 1481 Pfam ABC-2 type transporter 516 726 IPR013525 GO:0016020|GO:0140359
Car07g03162 1481 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 1481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03162 Car-Chr7 58866498 58877662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03162 K08711 - gmx:100798588 2560.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03162 07 58866498 58877662 Car07g03162 07 58866498 58877662 ECH
Car01g02752 01 52903540 52910603 Car07g03162 07 58866498 58877662 PCT