Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03140 ATGTATTCTTCCTTCAAATTCAAGCACTTCCACTTTTTCATCATATTCATATTCATATTACATGTCTTTGCTGCAACACCAATTTTGTCATTCAACAACTTTCTAGAAAGTGCCAAGAGTCCTGAGGTTTTTGATTGGATGATCAGTATCAGAAGGAAGATTCATGAGAATCCAGAATTGGGTTATCAAGAATTTGAGACCAGTGAACTGATAAGATCAGAATTGGATAAATTGGGTATTTCTTATAAACATCCAGTGGCAGTCACTGGTGTCATTGGTTTCATAGGAAATGGAATGTCTCCTTTTGTTGCTTTAAGAGCTGACATGGATGCTCTAGCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCACGCGTGTGGTCATGATGCTCATGTTACCATGTTACTTGGTGCTGCAAAGATTCTCAAAGAACATGAAAAAGAGATACAAGGAACTGTTGTTCTTGTTTTTCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAGAAGATTGTAGATGCTGGAGCATTAGAAAATGTAACTGCTATCTTTGGATTGCATATTGCTCCTGAATTACCAATAGGTGAAGTGGCCTCTAAGTCTGGTCCAATATTGGCAGGAAGTGGCCGCTTTGAAGCAAAGATAAATGGAAAGGGAGGTCATGCAGCTATTCCTCAAAAGTCTATTGATCCCATATTAGCAGCTTCCAATGTGATTATTAGCTTACAACACCTTGTTTCTCGTGAGGCCGATCCTCTAGACTCCCAGGTTGTGACAATTGCAATGTTCCAAGGAGGTAGTGCATTCAATGTTATTCCAGATTATGTCACAATTGGTGGCACCTTCCGAGCCTTTTCTAAACAAAGCTTCAACCAACTGAGACAGAGGATCGAGGAGGTTATAGTTGGACAAGCTGCTGTACAAAGATGCAATGCAACTGTGAACTTCTTTGATGAATCGAAACCTTCCTATCCTCCAACGGTAAACAATGGTGACTTGCATGAGCATTTTGTGAATGTTGCAGTGGATATGCTTGGTATCAATAAAGTTGATAGTGTCACACAACCATCCATGGGAGCTGAAGACTTTTCATTCTATCAAGAGGTCATACCTGGCTACTTCTTCATGCTTGGAATGCAGAATGCCTCAAATAACCGGTTCGACTCATTACACTCACCTTATCTCACAATCAATGAAGATGGACTTCCTTATGGGTGGTCCAAAGTAGAACTAGCCGATCATTGA 1263 0.4101 MYSSFKFKHFHFFIIFIFILHVFAATPILSFNNFLESAKSPEVFDWMISIRRKIHENPELGYQEFETSELIRSELDKLGISYKHPVAVTGVIGFIGNGMSPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKEHEKEIQGTVVLVFQPAEEGGGGAKKIVDAGALENVTAIFGLHIAPELPIGEVASKSGPILAGSGRFEAKINGKGGHAAIPQKSIDPILAASNVIISLQHLVSREADPLDSQVVTIAMFQGGSAFNVIPDYVTIGGTFRAFSKQSFNQLRQRIEEVIVGQAAVQRCNATVNFFDESKPSYPPTVNNGDLHEHFVNVAVDMLGINKVDSVTQPSMGAEDFSFYQEVIPGYFFMLGMQNASNNRFDSLHSPYLTINEDGLPYGWSKVELADH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03140 420 PIRSF Amidohydrol_AmhX 33 416 IPR017439 GO:0016787
Car07g03140 420 SUPERFAMILY Bacterial exopeptidase dimerisation domain 213 322 IPR036264 -
Car07g03140 420 Pfam Peptidase family M20/M25/M40 104 409 IPR002933 GO:0016787
Car07g03140 420 Gene3D Zn peptidases 47 407 - -
Car07g03140 420 Gene3D - 212 330 - -
Car07g03140 420 TIGRFAM amidohydrolases: amidohydrolase 47 410 IPR017439 GO:0016787
Car07g03140 420 Pfam Peptidase dimerisation domain 213 307 IPR011650 -
Car07g03140 420 SUPERFAMILY Zn-dependent exopeptidases 42 412 - -
Car07g03140 420 CDD M20_IAA_Hyd 47 411 IPR044757 GO:0009850|GO:0016787
Car07g03140 420 PANTHER PEPTIDASE M20 FAMILY MEMBER 12 412 IPR017439 GO:0016787
Car07g03140 420 PANTHER AUXIN CONJUGATE HYDROLASE 12 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03140 Car-Chr7 58612047 58617171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03140 K21604 K14664 gmx:100794121 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03140 07 58612047 58617171 Car07g03140 07 58612047 58617171 ECH
Car01g02734 01 52729632 52734053 Car07g03140 07 58612047 58617171 PCT