Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02734 ATGGATTTCTTCAAATGGGTGAACTTGTTCTTCATCATTTTCAATTGCTTTTTACCAATCTTCTCAAATTCCTCTTCCacttcaaatgacaacttgccaatcaacaagttccttgatttagcCAAAAACCCTCAAGTTTTTGATTGGATGGTGGATATAAGGAGGAAGATTCATGAGAAACCAGAATTGGCTTATGAGGAATTTGAAACCAGTGAGTTGATTAGAGCAAAATTGGATGAATTGGGTATTCCTTATAAACACCCAGTTGCAGTCACAGGTGTTATTGGTTACATAGGAACTGGTCTTCCTCCTTTTGTTGCACTCAGAGCTGACATGGATGCTCTTCTCATGCAGGAATTGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCATGTGGTCATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATTCTCAAGGGCCTTGAGAAAGAGTTACCAGGAACTGTTGTTCTTGTTTTTCAACCGGCAGAAGAAGGAGCTGGTGGGGCTAAGAAAGTTGTAGATGCTGGAGTCTTAGAAAATGTCTCTGCCATATTTGGACTACATGTCAATCATAACTTACGTTTAGGTGAAGTGGCATCTAGGTCTGGTCCTTTGTTTGCAGGAAGTGGCTTCTTTGAAGCAATAATAAGCGGCAAAGGAGGCCATGCTGCCATTCCTCAACATTCTATTGACCCCATATTGGCAGCTTCCAATGTGATTGTTAGCTTACAACATATTGTTTCTCGCGAGGCCGATCCCCTGGATTCCCAGGTTGTGACTGTAGCAAAATTTCAAGGAGGCGGTGCATTCAATGTTATTCCAGATTCTGTCACAATTGGTGGCACCTTCCGAGTTTTTTCGGACAAAAGCTTAAAGCAACTGAGAAGCCGGATTGAGCAGGTTATCACAGGACAGGCTGCTGTCCACAGATGCAATGCAACAGTCAGCTTCCTTGAAGAAGAGATGGGTTTATCCCCTCCAACTATAAACAATGGTGGCTTGCATGGCTATTTCCAAAGTATCGCCGGGAGTGTGCTTGGTGTTGATAAAGTTAAGGACATGCAACCGGTGATGGGATCAGAGGACTTTGCGTTCTATCAACAGGCTTTGCCGGGATACATCTTCCTCCTTGGAATGGAGAATCCCTCCGTCGAACGTCTTCATTTGCCGCATTCACCGTATTTCAAAATCAATGAAGATGCACTTCCTTATGGCGCGGCACTTCATGCCGCTTTAGCTGCTAGGTATCTTGTTGAATTTCATCAGGAGGTATCAGTAGTAGAGGGGAAATATCATGATGAATTATAA 1332 0.4227 MDFFKWVNLFFIIFNCFLPIFSNSSSTSNDNLPINKFLDLAKNPQVFDWMVDIRRKIHEKPELAYEEFETSELIRAKLDELGIPYKHPVAVTGVIGYIGTGLPPFVALRADMDALLMQELVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKGLEKELPGTVVLVFQPAEEGAGGAKKVVDAGVLENVSAIFGLHVNHNLRLGEVASRSGPLFAGSGFFEAIISGKGGHAAIPQHSIDPILAASNVIVSLQHIVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRVFSDKSLKQLRSRIEQVITGQAAVHRCNATVSFLEEEMGLSPPTINNGGLHGYFQSIAGSVLGVDKVKDMQPVMGSEDFAFYQQALPGYIFLLGMENPSVERLHLPHSPYFKINEDALPYGAALHAALAARYLVEFHQEVSVVEGKYHDEL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02734 443 PIRSF Amidohydrol_AmhX 36 427 IPR017439 GO:0016787
Car01g02734 443 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 443 IPR017439 GO:0016787
Car01g02734 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 324 IPR036264 -
Car01g02734 443 Pfam Peptidase family M20/M25/M40 107 421 IPR002933 GO:0016787
Car01g02734 443 Pfam Peptidase dimerisation domain 216 314 IPR011650 -
Car01g02734 443 Gene3D - 215 333 - -
Car01g02734 443 Gene3D Zn peptidases 50 410 - -
Car01g02734 443 CDD M20_IAA_Hyd 50 425 IPR044757 GO:0009850|GO:0016787
Car01g02734 443 SUPERFAMILY Zn-dependent exopeptidases 45 426 - -
Car01g02734 443 PANTHER AUXIN CONJUGATE HYDROLASE 1 443 - -
Car01g02734 443 TIGRFAM amidohydrolases: amidohydrolase 50 412 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02734 Car-Chr1 52729632 52734053 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02734 K21604 - mtr:MTR_2g100560 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02734 01 52729632 52734053 Car07g03140 07 58612047 58617171 PCT