Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03126 ATGGACGGTGGCGATGAGGCCGTTGTAGCTCCGGAGGGTCCACAGCAACCGCTTGAGTGGAAATTCTCGCAAGTTTTTGGCGAACGTGCGGTTGGAGAGGAAGTTCAAGAAGTGGACATAATTTCGGCTATTGAATTTGACAAATCTGGTGACCATCTTGCTACCGGTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATACAAAAGACAATGGATCGAGAAGGGATTTGGAGAGAATGGACTATTCTATCAGGCATCCTGAATTCCGCTATAAAACTGAGTTTCAGAGTCACGAGCCCGAGTTTGATTATCTTAAGAGCTTGGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCTAATGGTGCTTTGTTCCTTCTATCTACAAATGACAAAACAATCAAATATTGGAAGGTTCAAGAAAAGAAGGTGAAGAAAGTTTCTGAAATGAATATCGACCCTTCAAAAGCAATGGGAAATGGATCTATTGCTAGTTCAAGTAATTCGAGTAACTCTAAGCCACATCTTGCAAATGGAGGATCCTCAGATAAATCATATGGTTATCTAAGCAATGATTTCTCATTTCCACCAGGAGGCTTACCTTCGCTAAGATTACCCTCGGTAGTAGCTAGCCACGAGACCAGTCTATTGGCTCGATGCCGTCGAGTATATGCACATGCTCATGACTATCACATCAATTCTATTTCAAATAACAGCGATGGAGAAACTTTCATATCGGCTGATGATTTGCGTATAAATCTTTGGAACTTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACTGAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCCTATAGCAGTTCAAAGGGTTCAATTCGTCTTGTTGACTTGCGGCAGTCAGCCTTATGCGATTCTCATGCCAAACTATTTGAGGAACAGGAGGCACCTGGGTCCAGATCATTTTTCACAGAGATTATTGCTTCTATCTCAGATATAAAATTTGCAAAGGAAGGAAGATATATTCTTAGTCGTGATTACATGACTCTGAAGTTATGGGATATTAATATGGATTCTGGCCCAGTTTCAACGTTCCGGGTTCACGAGTACTTAAGGCCAAAGCTATGTGATTTATACGAAAATGACTCCATTTTTGACAAGTTCGAGTGTTGTCTGAGCGGTGATGGATTGCGTGTTTCAACTGGTTCTTACAGCAATCTATTCCGTGTGTTCGGTTGTGCCCCGGGAAGTACAGAGGCTACTACTTTGGAAGCCAGTAAAAATCCAATGAGACGACAAGTTCCAACGCCTTCAAGGCCTTCTAGATCACTTGGAAACAGTATCACAAGAGTTGTAAGACGCGGAGCTGATAACACCGGTGTCGATGCAAATGGAAACTCTTTTGATTTCACTACAAAGTTACTACACTTAGCATGGCACCCAACTGAAAATTCAATTGCTTGTGCTGCTGCAAATAGCTTATACATGTACTATGCATGA 1545 0.4136 MDGGDEAVVAPEGPQQPLEWKFSQVFGERAVGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDNGSRRDLERMDYSIRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKYWKVQEKKVKKVSEMNIDPSKAMGNGSIASSSNSSNSKPHLANGGSSDKSYGYLSNDFSFPPGGLPSLRLPSVVASHETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKEGRYILSRDYMTLKLWDINMDSGPVSTFRVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGADNTGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03126 514 MobiDBLite consensus disorder prediction 163 183 - -
Car07g03126 514 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 2 514 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 MobiDBLite consensus disorder prediction 441 461 - -
Car07g03126 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 103 117 IPR018067 -
Car07g03126 514 Gene3D - 34 197 IPR015943 GO:0005515
Car07g03126 514 MobiDBLite consensus disorder prediction 155 183 - -
Car07g03126 514 Gene3D - 208 511 IPR015943 GO:0005515
Car07g03126 514 SMART WD40_4 272 312 IPR001680 GO:0005515
Car07g03126 514 SMART WD40_4 222 261 IPR001680 GO:0005515
Car07g03126 514 SMART WD40_4 103 143 IPR001680 GO:0005515
Car07g03126 514 SMART WD40_4 31 66 IPR001680 GO:0005515
Car07g03126 514 Pfam WD domain, G-beta repeat 225 261 IPR001680 GO:0005515
Car07g03126 514 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 2 514 - -
Car07g03126 514 PIRSF PPA2_B55 10 514 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 90 118 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 119 147 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 233 260 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 261 288 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 289 317 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 318 345 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 346 373 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 374 399 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 400 426 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 483 512 IPR000009 GO:0000159|GO:0019888
Car07g03126 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 231 245 IPR018067 -
Car07g03126 514 SUPERFAMILY WD40 repeat-like 39 506 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03126 Car-Chr7 58466988 58474261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03126 K04354 - gmx:100799449 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03126 07 58466988 58474261 Car01g02724 01 52663932 52670909 ECH
Car07g03126 07 58466988 58474261 Car07g03126 07 58466988 58474261 ECH
Car01g02724 01 52663932 52670909 Car07g03126 07 58466988 58474261 PCT